5x6y

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Current revision (07:54, 22 November 2023) (edit) (undo)
 
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<StructureSection load='5x6y' size='340' side='right'caption='[[5x6y]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='5x6y' size='340' side='right'caption='[[5x6y]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5x6y]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X6Y OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5X6Y FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5x6y]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rice_dwarf_virus_(isolate_O) Rice dwarf virus (isolate O)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X6Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X6Y FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5x6x|5x6x]], [[5x6z|5x6z]], [[5x70|5x70]], [[5x71|5x71]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/mRNA_guanylyltransferase mRNA guanylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.50 2.7.7.50] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x6y OCA], [https://pdbe.org/5x6y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x6y RCSB], [https://www.ebi.ac.uk/pdbsum/5x6y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x6y ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5x6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x6y OCA], [http://pdbe.org/5x6y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x6y RCSB], [http://www.ebi.ac.uk/pdbsum/5x6y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x6y ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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==See Also==
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[https://www.uniprot.org/uniprot/MCE_RDVA MCE_RDVA] Enzyme involved in mRNA capping (Potential). Binds to GTP and might have guanylyltransferase activity. Together with the RNA-directed RNA polymerase P1 and protein P7, forms an transcriptional complex positioned near the channels situated at each of the five-fold vertices of the core (By similarity).
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*[[MRNA capping enzyme|MRNA capping enzyme]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: MRNA guanylyltransferase]]
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[[Category: Higashiura A]]
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[[Category: Higashiura, A]]
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[[Category: Nakagawa A]]
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[[Category: Nakagawa, A]]
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[[Category: Nakamichi Y]]
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[[Category: Nakamichi, Y]]
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[[Category: Guanylyltransferase]]
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[[Category: Methyltransferase]]
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[[Category: Mrna 5'-capping enzyme]]
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[[Category: Transferase]]
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Current revision

Crystal structure of Rice Dwarf Virus P5 in complex with S-adenosylmethionine

PDB ID 5x6y

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