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5xxo

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Current revision (08:17, 22 November 2023) (edit) (undo)
 
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==Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose==
==Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose==
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<StructureSection load='5xxo' size='340' side='right' caption='[[5xxo]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
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<StructureSection load='5xxo' size='340' side='right'caption='[[5xxo]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5xxo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XXO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5XXO FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5xxo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XXO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XXO FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.02&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BT_3567 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226186 BACTN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5xxo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xxo OCA], [http://pdbe.org/5xxo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xxo RCSB], [http://www.ebi.ac.uk/pdbsum/5xxo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xxo ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xxo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xxo OCA], [https://pdbe.org/5xxo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xxo RCSB], [https://www.ebi.ac.uk/pdbsum/5xxo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xxo ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8A1U1_BACTN Q8A1U1_BACTN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5xxo" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5xxo" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bactn]]
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[[Category: Bacteroides thetaiotaomicron VPI-5482]]
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[[Category: Abe, K]]
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[[Category: Large Structures]]
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[[Category: Ishiguro, R]]
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[[Category: Abe K]]
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[[Category: Maeda, T]]
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[[Category: Ishiguro R]]
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[[Category: Miyanaga, A]]
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[[Category: Maeda T]]
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[[Category: Nakai, H]]
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[[Category: Miyanaga A]]
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[[Category: Nakajima, M]]
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[[Category: Nakai H]]
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[[Category: Sugimoto, N]]
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[[Category: Nakajima M]]
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[[Category: Taguchi, H]]
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[[Category: Sugimoto N]]
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[[Category: Takahash, Y]]
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[[Category: Taguchi H]]
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[[Category: Tanaka, N]]
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[[Category: Takahash Y]]
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[[Category: Beta-glucosidase]]
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[[Category: Tanaka N]]
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[[Category: Glycoside hydrolase family 3]]
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[[Category: Hydrolase]]
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Current revision

Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose

PDB ID 5xxo

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