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5y0p

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Current revision (08:18, 22 November 2023) (edit) (undo)
 
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==Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP==
==Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP==
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<StructureSection load='5y0p' size='340' side='right' caption='[[5y0p]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='5y0p' size='340' side='right'caption='[[5y0p]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5y0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y0P FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5y0p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Y0P FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TAT:ADENOSINE-5-RP-ALPHA-THIO-TRIPHOSPHATE'>TAT</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">B4417_3650 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TAT:ADENOSINE-5-RP-ALPHA-THIO-TRIPHOSPHATE'>TAT</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y0p OCA], [http://pdbe.org/5y0p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y0p RCSB], [http://www.ebi.ac.uk/pdbsum/5y0p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y0p ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5y0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y0p OCA], [https://pdbe.org/5y0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5y0p RCSB], [https://www.ebi.ac.uk/pdbsum/5y0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5y0p ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TMCAL_BACSU TMCAL_BACSU] Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac-AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.[HAMAP-Rule:MF_01539]<ref>PMID:30150682</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Vibrio subtilis ehrenberg 1835]]
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[[Category: Bacillus subtilis]]
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[[Category: Tomita, K]]
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[[Category: Large Structures]]
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[[Category: Yamashita, S]]
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[[Category: Tomita K]]
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[[Category: Acetate ligase]]
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[[Category: Yamashita S]]
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[[Category: Ligase]]
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Current revision

Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP

PDB ID 5y0p

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