5yow
From Proteopedia
(Difference between revisions)
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<StructureSection load='5yow' size='340' side='right'caption='[[5yow]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='5yow' size='340' side='right'caption='[[5yow]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5yow]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5yow]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Heartland_virus Heartland virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YOW FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yow OCA], [https://pdbe.org/5yow PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yow RCSB], [https://www.ebi.ac.uk/pdbsum/5yow PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yow ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/GP_HTRV GP_HTRV] Structural component of the virion that interacts with glycoprotein C (By similarity). It shields the hydrophobic fusion loops of the glycoprotein C, preventing premature fusion (By similarity). The glycoprotein protrusions are arranged on an icosahedral lattice, with T=12 triangulation (By similarity). They are able to attach the virion to the host cell receptor CD209/DC-SIGN and to promote fusion of membranes with the late endosome after endocytosis of the virion (Probable). Plays a role in the packaging of ribonucleoproteins during virus assembly (By similarity).[UniProtKB:P03518][UniProtKB:P09613][UniProtKB:P21401]<ref>PMID:33561699</ref> Structural component of the virion that interacts with glycoprotein N (By similarity). Acts as a class II fusion protein that is activated upon acidification and subsequent repositioning of the glycoprotein N (PubMed:29070692). The glycoprotein protrusions are arranged on an icosahedral lattice, with T=12 triangulation (By similarity). They are able to attach the virion to the host cell receptor CD209/DC-SIGN and to promote fusion of membranes with the late endosome after endocytosis of the virion (Probable).[UniProtKB:P03518][UniProtKB:P09613]<ref>PMID:29070692</ref> <ref>PMID:33561699</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: Heartland virus]] | [[Category: Heartland virus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Chai | + | [[Category: Chai Y]] |
| - | [[Category: Gao | + | [[Category: Gao F]] |
| - | [[Category: Qi | + | [[Category: Qi JX]] |
| - | [[Category: Wu | + | [[Category: Wu Y]] |
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Current revision
The post-fusion structure of the Heartland virus Gc glycoprotein
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Categories: Heartland virus | Large Structures | Chai Y | Gao F | Qi JX | Wu Y
