5z05

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Current revision (08:42, 22 November 2023) (edit) (undo)
 
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<StructureSection load='5z05' size='340' side='right'caption='[[5z05]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
<StructureSection load='5z05' size='340' side='right'caption='[[5z05]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5z05]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5wsi 5wsi] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4s06 4s06]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z05 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5Z05 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5z05]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5wsi 5wsi] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4s06 4s06]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z05 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Z05 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACN:ACETONE'>ACN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.49&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5z05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z05 OCA], [http://pdbe.org/5z05 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5z05 RCSB], [http://www.ebi.ac.uk/pdbsum/5z05 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5z05 ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACN:ACETONE'>ACN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5z05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z05 OCA], [https://pdbe.org/5z05 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5z05 RCSB], [https://www.ebi.ac.uk/pdbsum/5z05 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5z05 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CH3L1_BUBBU CH3L1_BUBBU]] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).
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[https://www.uniprot.org/uniprot/CH3L1_BUBBU CH3L1_BUBBU] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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[[Category: Bubalus bubalis]]
[[Category: Bubalus bubalis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chaudhary, A]]
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[[Category: Chaudhary A]]
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[[Category: Kaur, P]]
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[[Category: Kaur P]]
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[[Category: Sharma, S]]
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[[Category: Sharma S]]
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[[Category: Singh, P K]]
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[[Category: Singh PK]]
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[[Category: Singh, T P]]
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[[Category: Singh TP]]
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[[Category: Tyagi, T K]]
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[[Category: Tyagi TK]]
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[[Category: Signaling protein]]
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Current revision

Crystal structure of signalling protein from buffalo (SPB-40) with an acetone induced conformation of Trp78 at 1.49 A resolution

PDB ID 5z05

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