This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5z6u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:47, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5z6u' size='340' side='right'caption='[[5z6u]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='5z6u' size='340' side='right'caption='[[5z6u]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5z6u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Picst Picst]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z6U OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5Z6U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5z6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Scheffersomyces_stipitis_CBS_6054 Scheffersomyces stipitis CBS 6054]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Z6U FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">XYL1, PICST_89614 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=322104 PICST])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-xylose_reductase D-xylose reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.307 1.1.1.307] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5z6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z6u OCA], [https://pdbe.org/5z6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5z6u RCSB], [https://www.ebi.ac.uk/pdbsum/5z6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5z6u ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5z6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z6u OCA], [http://pdbe.org/5z6u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5z6u RCSB], [http://www.ebi.ac.uk/pdbsum/5z6u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5z6u ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/XYL1_PICST XYL1_PICST]] Reduces D-xylose into xylitol. Has a preference for NADPH, but can also utilize NADH as cosubstrate.<ref>PMID:3921014</ref>
+
[https://www.uniprot.org/uniprot/XYL1_PICST XYL1_PICST] Reduces D-xylose into xylitol. Has a preference for NADPH, but can also utilize NADH as cosubstrate.<ref>PMID:3921014</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: D-xylose reductase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Picst]]
+
[[Category: Scheffersomyces stipitis CBS 6054]]
-
[[Category: Kim, K J]]
+
[[Category: Kim KJ]]
-
[[Category: Son, H F]]
+
[[Category: Son HF]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Pontose metabolism]]
+
-
[[Category: Scheffersomyces stipitis]]
+
-
[[Category: Xylose reductase]]
+

Current revision

Crystal structure of D-xylose reductase from Scheffersomyces stipitis

PDB ID 5z6u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5z6u"
Personal tools