5zza

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Current revision (09:10, 22 November 2023) (edit) (undo)
 
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==OdinProfilin/Rabbit Actin Complex==
==OdinProfilin/Rabbit Actin Complex==
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<StructureSection load='5zza' size='340' side='right' caption='[[5zza]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
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<StructureSection load='5zza' size='340' side='right'caption='[[5zza]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5zza]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Candidatus_odinarchaeota_archaeon_lcb_4 Candidatus odinarchaeota archaeon lcb_4] and [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZZA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZZA FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5zza]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidatus_Odinarchaeota_archaeon_LCB_4 Candidatus Odinarchaeota archaeon LCB_4] and [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZZA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZZA FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=LAB:LATRUNCULIN+B'>LAB</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.53&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=HIC:4-METHYL-HISTIDINE'>HIC</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HIC:4-METHYL-HISTIDINE'>HIC</scene>, <scene name='pdbligand=LAB:LATRUNCULIN+B'>LAB</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5yee|5yee]], [[5yed|5yed]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zza FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zza OCA], [https://pdbe.org/5zza PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zza RCSB], [https://www.ebi.ac.uk/pdbsum/5zza PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zza ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OdinLCB4_14170 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1841599 Candidatus Odinarchaeota archaeon LCB_4])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5zza FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zza OCA], [http://pdbe.org/5zza PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zza RCSB], [http://www.ebi.ac.uk/pdbsum/5zza PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zza ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/ACTS_RABIT ACTS_RABIT]] Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
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[https://www.uniprot.org/uniprot/PROF_ODILC PROF_ODILC] Binds to actin and affects the structure of the cytoskeleton. At high concentrations inhibits spontaneous rabbit actin nucleation. This strongly suggests this archaea has a profilin-regulated actin system, and actin-type genes can be identified in this organism.<ref>PMID:30283132</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5zza" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5zza" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Actin 3D structures|Actin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Candidatus odinarchaeota archaeon lcb_4]]
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[[Category: Candidatus Odinarchaeota archaeon LCB_4]]
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[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
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[[Category: Akil, C]]
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[[Category: Akil C]]
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[[Category: Robinson, R C]]
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[[Category: Robinson RC]]
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[[Category: Actin]]
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[[Category: Archaea]]
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[[Category: Odin]]
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[[Category: Structural protein]]
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Current revision

OdinProfilin/Rabbit Actin Complex

PDB ID 5zza

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