This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6abw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:24, 22 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of citrate synthase (Msed_0281) from Metallosphaera sedula in complex with acetyl-CoA==
==Crystal structure of citrate synthase (Msed_0281) from Metallosphaera sedula in complex with acetyl-CoA==
-
<StructureSection load='6abw' size='340' side='right' caption='[[6abw]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
+
<StructureSection load='6abw' size='340' side='right'caption='[[6abw]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6abw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mets5 Mets5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ABW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ABW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6abw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Metallosphaera_sedula_DSM_5348 Metallosphaera sedula DSM 5348]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ABW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ABW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Msed_0281 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=399549 METS5])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Citrate_synthase_(unknown_stereospecificity) Citrate synthase (unknown stereospecificity)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.3.16 2.3.3.16] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6abw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6abw OCA], [https://pdbe.org/6abw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6abw RCSB], [https://www.ebi.ac.uk/pdbsum/6abw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6abw ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6abw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6abw OCA], [http://pdbe.org/6abw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6abw RCSB], [http://www.ebi.ac.uk/pdbsum/6abw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6abw ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A4YDF6_METS5 A4YDF6_METS5]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 6abw" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6abw" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Citrate Synthase 3D structures|Citrate Synthase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Mets5]]
+
[[Category: Large Structures]]
-
[[Category: Kim, K J]]
+
[[Category: Metallosphaera sedula DSM 5348]]
-
[[Category: Lee, S H]]
+
[[Category: Kim K-J]]
-
[[Category: Citrate synthase]]
+
[[Category: Lee S-H]]
-
[[Category: Metallosphaera sedula]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of citrate synthase (Msed_0281) from Metallosphaera sedula in complex with acetyl-CoA

PDB ID 6abw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools