6ite

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Current revision (09:52, 22 November 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6ite is ON HOLD until Nov 21 2020
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==Crystal structure of group A Streptococcal surface dehydrogenase (SDH)==
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<StructureSection load='6ite' size='340' side='right'caption='[[6ite]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6ite]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ITE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ITE FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.739&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ite FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ite OCA], [https://pdbe.org/6ite PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ite RCSB], [https://www.ebi.ac.uk/pdbsum/6ite PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ite ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/G3P_STRPY G3P_STRPY]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Streptococcus pyogenes (group A Streptococcus, GAS) has caused a wide variety of human diseases. Its multifunctional surface dehydrogenase (SDH) is crucial for GAS life cycle. Furthermore, GAS infection into human pharyngeal cells has been previously shown to be mediated by the interaction between SDH and host urokinase-type plasminogen activator receptor (uPAR). However, the structural information of SDH remains to be elucidated and there are few detailed studies to characterize its interaction with uPAR. In-depth research on these issues will provide potential targets and strategies for combating GAS. Here, we prepared recombinant SDH tetramer in Escherichia coli BL21 (DE3) cells. After purification and crystallization, we determined its crystal structure at 1.74 A. The unique characteristics might be potentially explored as drug targets or vaccine immunogen. We subsequently performed gel filtration chromatography, native-polyacrylamide gel electrophoresis (PAGE) and in vitro pull-down analyses. The results showed that their interaction was too weak to form stable complexes and the role of uPAR involved in GAS infection needs further demonstration. Altogether the current work provides the first view of SDH and deepens the knowledge of GAS infection.
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Authors:
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Structural determination of group A Streptococcal surface dehydrogenase and characterization of its interaction with urokinase-type plasminogen activator receptor.,Li R, Liang C, Jiang L, Yuan C, Huang M Biochem Biophys Res Commun. 2019 Mar 19;510(4):539-544. doi: , 10.1016/j.bbrc.2019.01.102. Epub 2019 Feb 6. PMID:30737033<ref>PMID:30737033</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6ite" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Glyceraldehyde-3-phosphate dehydrogenase 3D structures|Glyceraldehyde-3-phosphate dehydrogenase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Streptococcus pyogenes]]
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[[Category: Huang MD]]
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[[Category: Li R]]
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[[Category: Yuan C]]

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Crystal structure of group A Streptococcal surface dehydrogenase (SDH)

PDB ID 6ite

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