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| | <StructureSection load='6j2b' size='340' side='right'caption='[[6j2b]], [[Resolution|resolution]] 1.44Å' scene=''> | | <StructureSection load='6j2b' size='340' side='right'caption='[[6j2b]], [[Resolution|resolution]] 1.44Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6j2b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J2B OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6J2B FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6j2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6J2B FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TSL:TRANS-ENAMINE+INTERMEDIATE+OF+SULBACTAM'>TSL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.44Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">blaCTX-M-64 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TSL:TRANS-ENAMINE+INTERMEDIATE+OF+SULBACTAM'>TSL</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6j2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j2b OCA], [https://pdbe.org/6j2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6j2b RCSB], [https://www.ebi.ac.uk/pdbsum/6j2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6j2b ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6j2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j2b OCA], [http://pdbe.org/6j2b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6j2b RCSB], [http://www.ebi.ac.uk/pdbsum/6j2b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6j2b ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/C8CP57_ECOLX C8CP57_ECOLX] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </div> | | </div> |
| | <div class="pdbe-citations 6j2b" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 6j2b" style="background-color:#fffaf0;"></div> |
| | + | |
| | + | ==See Also== |
| | + | *[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Bacillus coli migula 1895]] | + | [[Category: Escherichia coli]] |
| - | [[Category: Beta-lactamase]]
| + | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Chen, S]] | + | [[Category: Chen S]] |
| - | [[Category: Cheng, Q]] | + | [[Category: Cheng Q]] |
| - | [[Category: Beta-lactamase inhibitor complex]]
| + | |
| - | [[Category: Hydrolase-inhibitor complex]]
| + | |
| Structural highlights
Function
C8CP57_ECOLX
Publication Abstract from PubMed
The smart design of beta-lactamase inhibitors allowed us to combat extended-spectrum beta-lactamase (ESBL)-producing organisms for many years without developing resistance to these inhibitors. However, novel resistant variants have emerged recently, and notable examples are the CTX-M-190 and CTX-M-199 variants, which carried a S(130)T amino acid substitution and exhibited resistance to inhibitors such as sulbactam and tazobactam. Using mass spectrometric and crystallographic approaches, this study depicted the mechanisms of inhibitor resistance. Our data showed that CTX-M-64 (S(130)T) did not cause any conformational change or exert any effect on its ability to hydrolyze beta-lactam substrates. However, binding of sulbactam, but not clavulanic acid, to the active site of CTX-M-64 (S(130)T) led to the conformational changes in such active site, which comprised the key residues involved in substrate catalysis, namely, Thr(130), Lys(73), Lys(234), Asn(104), and Asn(132). This conformational change weakened the binding of the sulbactam trans-enamine intermediate (TSL) to the active site and rendered the formation of the inhibitor-enzyme complex, which features a covalent acrylic acid (AKR)-T(130) bond, inefficient, thereby resulting in inhibitor resistance in CTX-M-64 (S(130)T). Understanding the mechanisms of inhibitor resistance provided structural insight for the future development of new inhibitors against inhibitor-resistant beta-lactamases.
Structural Insight into the Mechanism of Inhibitor Resistance in CTX-M-199, a CTX-M-64 Variant Carrying the S(130)T Substitution.,Cheng Q, Xu C, Chai J, Zhang R, Wai Chi Chan E, Chen S ACS Infect Dis. 2020 Apr 10;6(4):577-587. doi: 10.1021/acsinfecdis.9b00345. Epub , 2019 Nov 21. PMID:31709791[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Cheng Q, Xu C, Chai J, Zhang R, Wai Chi Chan E, Chen S. Structural Insight into the Mechanism of Inhibitor Resistance in CTX-M-199, a CTX-M-64 Variant Carrying the S(130)T Substitution. ACS Infect Dis. 2020 Apr 10;6(4):577-587. doi: 10.1021/acsinfecdis.9b00345. Epub , 2019 Nov 21. PMID:31709791 doi:http://dx.doi.org/10.1021/acsinfecdis.9b00345
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