6j82

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:03, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6j82' size='340' side='right'caption='[[6j82]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='6j82' size='340' side='right'caption='[[6j82]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6j82]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J82 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6J82 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6j82]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_blastmyceticus Streptomyces blastmyceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J82 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6J82 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.202&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6j82 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j82 OCA], [http://pdbe.org/6j82 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6j82 RCSB], [http://www.ebi.ac.uk/pdbsum/6j82 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6j82 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6j82 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j82 OCA], [https://pdbe.org/6j82 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6j82 RCSB], [https://www.ebi.ac.uk/pdbsum/6j82 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6j82 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A077KEB8_9ACTN A0A077KEB8_9ACTN]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The catalytic versatility of cytochrome P450 monooxygenases is remarkable. Here, we present mechanistic and structural characterizations of TleB from Streptomyces blastmyceticus and its homolog HinD from Streptoalloteichus hindustanus, which catalyze unusual intramolecular C-N bond formation to generate indolactam V from the dipeptide N-methylvalyl-tryptophanol. In vitro analyses demonstrated that both P450s exhibit promiscuous substrate specificity, and modification of the N13-methyl group resulted in the formation of indole-fused 6/5/6 tricyclic products. Furthermore, X-ray crystal structures in complex with substrates and structure-based mutagenesis revealed the intimate structural details of the enzyme reactions. We propose that the generation of a diradical species is critical for the indolactam formation, and that the intramolecular C(sp(2))-H amination is initiated by the abstraction of the N1 indole hydrogen. After indole radical repositioning and subsequent removal of the N13 hydrogen, the coupling of the properly-folded diradical leads to the formation of the C4-N13 bond of indolactam.
 +
 +
Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.,He F, Mori T, Morita I, Nakamura H, Alblova M, Hoshino S, Awakawa T, Abe I Nat Chem Biol. 2019 Dec;15(12):1206-1213. doi: 10.1038/s41589-019-0380-9. Epub , 2019 Oct 21. PMID:31636430<ref>PMID:31636430</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6j82" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Abe, I]]
+
[[Category: Streptomyces blastmyceticus]]
-
[[Category: Alblova, M]]
+
[[Category: Abe I]]
-
[[Category: Mori, T]]
+
[[Category: Alblova M]]
-
[[Category: Nakamura, H]]
+
[[Category: Mori T]]
-
[[Category: Indolactam]]
+
[[Category: Nakamura H]]
-
[[Category: Oxidation]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: P450]]
+

Current revision

Crystal structure of TleB apo

PDB ID 6j82

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools