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| <StructureSection load='6jax' size='340' side='right'caption='[[6jax]], [[Resolution|resolution]] 1.70Å' scene=''> | | <StructureSection load='6jax' size='340' side='right'caption='[[6jax]], [[Resolution|resolution]] 1.70Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6jax]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Asian_corn_borer Asian corn borer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JAX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JAX FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6jax]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ostrinia_furnacalis Ostrinia furnacalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6JAX FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GCS:D-GLUCOSAMINE'>GCS</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5y29|5y29]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GCS:D-GLUCOSAMINE'>GCS</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Chitinase Chitinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.14 3.2.1.14] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6jax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jax OCA], [https://pdbe.org/6jax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6jax RCSB], [https://www.ebi.ac.uk/pdbsum/6jax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6jax ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jax OCA], [http://pdbe.org/6jax PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jax RCSB], [http://www.ebi.ac.uk/pdbsum/6jax PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jax ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A221ZS22_OSTFU A0A221ZS22_OSTFU] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </div> | | </div> |
| <div class="pdbe-citations 6jax" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 6jax" style="background-color:#fffaf0;"></div> |
| + | |
| + | ==See Also== |
| + | *[[Chitinase 3D structures|Chitinase 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Asian corn borer]] | |
- | [[Category: Chitinase]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Chen, W]] | + | [[Category: Ostrinia furnacalis]] |
- | [[Category: Yang, Q]] | + | [[Category: Chen W]] |
- | [[Category: Zhou, Y]] | + | [[Category: Yang Q]] |
- | [[Category: Hydrolase]] | + | [[Category: Zhou Y]] |
- | [[Category: Inhibitor complex]]
| + | |
| Structural highlights
Function
A0A221ZS22_OSTFU
Publication Abstract from PubMed
Small-molecule inhibitors of insect chitinases have potential applications for controlling insect pests. Insect group II chitinase (ChtII) is the most important chitinase in insects and functions throughout all developmental stages. However, the possibility of inhibiting ChtII by small molecules has not been explored yet. Here, we report the structural characteristics of four molecules that exhibited similar levels of inhibitory activity against OfChtII, a group II chitinase from the agricultural pest Asian corn borer (Ostrinia furnacalis). These inhibitors were chitooctaose (GlcN)8, dipyrido-pyrimidine derivative (DP), piperidine-thienopyridine derivative (PT), and naphthalimide derivative (NI). The crystal structures of the OfChtII catalytic domain complexed with each of the four inhibitors at 1.4~2.0 A resolutions suggested they all exhibit similar binding modes within the substrate-binding cleft; specifically, two hydrophobic groups of the inhibitor interact with +1/+2 tryptophan and a -1 hydrophobic pocket. The structure of the (GlcN)8 complex surprisingly revealed that the oligosaccharide chain of the inhibitor is orientated in the opposite direction to that previously observed in complexes with other chitinases. Injection of the inhibitors into 4th-instar O. furnacalis larvae led to defects in development and pupation. The results of this study provide insights into a general mechanistic principle that confers inhibitory activity against ChtII, which could facilitate rational design of agrochemicals that target ecdysis of insect pests.
Structural dissection reveals a general mechanistic principle for group II chitinase (ChtII) inhibition.,Chen W, Zhou Y, Yang Q J Biol Chem. 2019 May 3. pii: RA119.007812. doi: 10.1074/jbc.RA119.007812. PMID:31053640[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Chen W, Zhou Y, Yang Q. Structural dissection reveals a general mechanistic principle for group II chitinase (ChtII) inhibition. J Biol Chem. 2019 May 3. pii: RA119.007812. doi: 10.1074/jbc.RA119.007812. PMID:31053640 doi:http://dx.doi.org/10.1074/jbc.RA119.007812
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