6jby

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Current revision (10:06, 22 November 2023) (edit) (undo)
 
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<StructureSection load='6jby' size='340' side='right'caption='[[6jby]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='6jby' size='340' side='right'caption='[[6jby]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6jby]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Almond Almond]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JBY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6JBY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6jby]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prunus_dulcis Prunus dulcis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JBY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6JBY FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hnl5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3755 Almond])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/(R)-mandelonitrile_lyase (R)-mandelonitrile lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.10 4.1.2.10] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6jby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jby OCA], [https://pdbe.org/6jby PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6jby RCSB], [https://www.ebi.ac.uk/pdbsum/6jby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6jby ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6jby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jby OCA], [http://pdbe.org/6jby PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jby RCSB], [http://www.ebi.ac.uk/pdbsum/6jby PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jby ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MDL1_PRUDU MDL1_PRUDU] Involved in cyanogenesis, the release of HCN from injured tissues. Catalyzes the stereospecific addition of HCN to a variety of aldehydes in vitro. It is a major seed constituent, and could have the additional role of a storage form for reduced nitrogen (By similarity).
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Almond]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Li, F L]]
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[[Category: Prunus dulcis]]
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[[Category: Xu, J H]]
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[[Category: Li FL]]
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[[Category: Yu, H L]]
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[[Category: Xu JH]]
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[[Category: Zheng, Y C]]
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[[Category: Yu HL]]
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[[Category: Complex]]
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[[Category: Zheng YC]]
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[[Category: Endo-deglycosylated]]
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[[Category: Flavoprotein]]
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[[Category: Gmc oxidoreductases n and c superfamily]]
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[[Category: Lyase]]
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Current revision

Crystal structure of endo-deglycosylated hydroxynitrile lyase isozyme 5 of Prunus communis

PDB ID 6jby

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