6kd5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:30, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6kd5' size='340' side='right'caption='[[6kd5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='6kd5' size='340' side='right'caption='[[6kd5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6kd5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KD5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6kd5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KD5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=0QE:CHLOROMETHANE'>0QE</scene>, <scene name='pdbligand=AR7:AMINO{[(4S)-4-AMINO-5,5-DIHYDROXYPENTYL]AMINO}METHANIMINIUM'>AR7</scene>, <scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0QE:CHLOROMETHANE'>0QE</scene>, <scene name='pdbligand=AR7:AMINO{[(4S)-4-AMINO-5,5-DIHYDROXYPENTYL]AMINO}METHANIMINIUM'>AR7</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TMPRSS13, MSP, TMPRSS11 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6kd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kd5 OCA], [https://pdbe.org/6kd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6kd5 RCSB], [https://www.ebi.ac.uk/pdbsum/6kd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6kd5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6kd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kd5 OCA], [https://pdbe.org/6kd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6kd5 RCSB], [https://www.ebi.ac.uk/pdbsum/6kd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6kd5 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TMPSD_HUMAN TMPSD_HUMAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 6kd5" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6kd5" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Transmembrane protease serine 2|Transmembrane protease serine 2]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Maita, N]]
+
[[Category: Synthetic construct]]
-
[[Category: Nikawa, T]]
+
[[Category: Maita N]]
-
[[Category: Ohno, A]]
+
[[Category: Nikawa T]]
-
[[Category: Okumura, Y]]
+
[[Category: Ohno A]]
-
[[Category: Hydrolase]]
+
[[Category: Okumura Y]]
-
[[Category: Structural protein-inhibitor complex]]
+

Current revision

Crystal structure of the extracellular domain of MSPL/TMPRSS13 in complex with dec-RVKR-cmk inhibitor

PDB ID 6kd5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools