This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6l2j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:50, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6l2j' size='340' side='right'caption='[[6l2j]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
<StructureSection load='6l2j' size='340' side='right'caption='[[6l2j]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6l2j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_mutus Bos mutus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L2J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6L2J FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6l2j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_mutus Bos mutus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L2J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L2J FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OSM:1-(OXIDOSULFANYL)METHANAMINE'>OSM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.933&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OSM:1-(OXIDOSULFANYL)METHANAMINE'>OSM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6l2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l2j OCA], [http://pdbe.org/6l2j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6l2j RCSB], [http://www.ebi.ac.uk/pdbsum/6l2j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6l2j ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l2j OCA], [https://pdbe.org/6l2j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l2j RCSB], [https://www.ebi.ac.uk/pdbsum/6l2j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l2j ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PERL_BOVIN PERL_BOVIN] LPO is an antimicrobial agent. It is thought to help protect the udder from infection and promote growth in newborn calves.
 +
 +
==See Also==
 +
*[[Lactoperoxidase|Lactoperoxidase]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bos mutus]]
[[Category: Bos mutus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peroxidase]]
+
[[Category: Rani C]]
-
[[Category: Rani, C]]
+
[[Category: Sharma P]]
-
[[Category: Sharma, P]]
+
[[Category: Sharma S]]
-
[[Category: Sharma, S]]
+
[[Category: Singh TP]]
-
[[Category: Singh, T P]]
+
[[Category: Viswanathan V]]
-
[[Category: Viswanathan, V]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxide family]]
+

Current revision

Crystal structure of yak lactoperoxidase at 1.93 A resolution.

PDB ID 6l2j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools