6l8q

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Current revision (10:53, 22 November 2023) (edit) (undo)
 
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<StructureSection load='6l8q' size='340' side='right'caption='[[6l8q]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
<StructureSection load='6l8q' size='340' side='right'caption='[[6l8q]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6l8q]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/David's_myotis David's myotis] and [http://en.wikipedia.org/wiki/Mers Mers]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L8Q OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6L8Q FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6l8q]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Middle_East_respiratory_syndrome-related_coronavirus Middle East respiratory syndrome-related coronavirus] and [https://en.wikipedia.org/wiki/Myotis_davidii Myotis davidii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L8Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L8Q FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MDA_GLEAN10024208 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=225400 David's myotis])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6l8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l8q OCA], [http://pdbe.org/6l8q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6l8q RCSB], [http://www.ebi.ac.uk/pdbsum/6l8q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6l8q ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l8q OCA], [https://pdbe.org/6l8q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l8q RCSB], [https://www.ebi.ac.uk/pdbsum/6l8q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l8q ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A0A0A0Q7F3_9BETC A0A0A0Q7F3_9BETC]] Spike protein S1: attaches the virion to the cell membrane by interacting with host receptor, initiating the infection.[HAMAP-Rule:MF_04099] Spike protein S2': Acts as a viral fusion peptide which is unmasked following S2 cleavage occurring upon virus endocytosis.[HAMAP-Rule:MF_04099] Spike protein S2: mediates fusion of the virion and cellular membranes by acting as a class I viral fusion protein. Under the current model, the protein has at least three conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and target cell membrane fusion, the coiled coil regions (heptad repeats) assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and target cell membranes.[HAMAP-Rule:MF_04099]
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[https://www.uniprot.org/uniprot/L5LQ33_MYODS L5LQ33_MYODS]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6l8q" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6l8q" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Dipeptidyl peptidase 3D structures|Dipeptidyl peptidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: David's myotis]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Mers]]
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[[Category: Middle East respiratory syndrome-related coronavirus]]
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[[Category: Yuan, Y]]
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[[Category: Myotis davidii]]
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[[Category: Bat]]
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[[Category: Yuan Y]]
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[[Category: Complex]]
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[[Category: Coronavirus]]
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[[Category: Receptor]]
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[[Category: Structural protein]]
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Current revision

Complex structure of bat CD26 and MERS-RBD

PDB ID 6l8q

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