2mmw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==LASSO PEPTIDE BASED INTEGRIN INHIBITOR: MICROCIN J25 VARIANT WITH RGD SUBSTITUTION of GLY12-ILE13-GLY14==
==LASSO PEPTIDE BASED INTEGRIN INHIBITOR: MICROCIN J25 VARIANT WITH RGD SUBSTITUTION of GLY12-ILE13-GLY14==
-
<StructureSection load='2mmw' size='340' side='right'caption='[[2mmw]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2mmw' size='340' side='right'caption='[[2mmw]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2mmw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MMW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2mmw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MMW FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mmw OCA], [https://pdbe.org/2mmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mmw RCSB], [https://www.ebi.ac.uk/pdbsum/2mmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mmw ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mmw OCA], [https://pdbe.org/2mmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mmw RCSB], [https://www.ebi.ac.uk/pdbsum/2mmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mmw ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/MCJA_ECOLX MCJA_ECOLX]] Peptide antibiotic that functions through inhibition of the bacterial DNA-dependent RNA polymerase (RNAP). May inhibit transcription by binding in RNAP secondary channel and blocking nucleotide substrates access to the catalytic center. Exhibits potent bacteriocidal activity against a range of Enterobacteriaceae, including several pathogenic E.coli, Salmonella and Shigella strains. Also acts on the cytoplasmic membrane of Salmonella newport, producing alteration of membrane permeability and disruption of the subsequent gradient dissipation, which inhibits several processes essential for cell viability, such as oxygen consumption. Induces bacterial filamentation in susceptible cells in a non-SOS-dependent way, but this phenotype may result from impaired transcription of genes coding for cell division proteins.<ref>PMID:11731133</ref> <ref>PMID:11443089</ref> <ref>PMID:12401787</ref>
+
[https://www.uniprot.org/uniprot/MCJA_ECOLX MCJA_ECOLX] Peptide antibiotic that functions through inhibition of the bacterial DNA-dependent RNA polymerase (RNAP). May inhibit transcription by binding in RNAP secondary channel and blocking nucleotide substrates access to the catalytic center. Exhibits potent bacteriocidal activity against a range of Enterobacteriaceae, including several pathogenic E.coli, Salmonella and Shigella strains. Also acts on the cytoplasmic membrane of Salmonella newport, producing alteration of membrane permeability and disruption of the subsequent gradient dissipation, which inhibits several processes essential for cell viability, such as oxygen consumption. Induces bacterial filamentation in susceptible cells in a non-SOS-dependent way, but this phenotype may result from impaired transcription of genes coding for cell division proteins.<ref>PMID:11731133</ref> <ref>PMID:11443089</ref> <ref>PMID:12401787</ref>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Knappe, T A]]
+
[[Category: Knappe TA]]
-
[[Category: Linne, U]]
+
[[Category: Linne U]]
-
[[Category: Marahiel, M A]]
+
[[Category: Marahiel MA]]
-
[[Category: Xie, X]]
+
[[Category: Xie X]]
-
[[Category: Angiogenesis]]
+
-
[[Category: Antibiotic]]
+
-
[[Category: Antimicrobial protein]]
+
-
[[Category: Cell adhesion inhibitor]]
+
-
[[Category: Epitope grafting]]
+
-
[[Category: Integrin inhibitor]]
+
-
[[Category: Lasso peptide]]
+
-
[[Category: Microcin j25]]
+
-
[[Category: Peptide scaffold]]
+

Revision as of 11:57, 22 November 2023

LASSO PEPTIDE BASED INTEGRIN INHIBITOR: MICROCIN J25 VARIANT WITH RGD SUBSTITUTION of GLY12-ILE13-GLY14

PDB ID 2mmw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2mmw"
Personal tools