5nrh

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<StructureSection load='5nrh' size='340' side='right'caption='[[5nrh]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='5nrh' size='340' side='right'caption='[[5nrh]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5nrh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pseudomallei"_whitmore_1913 "bacillus pseudomallei" whitmore 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NRH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NRH FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5nrh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NRH FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ddl, BURPS1106A_3548 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nrh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nrh OCA], [https://pdbe.org/5nrh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nrh RCSB], [https://www.ebi.ac.uk/pdbsum/5nrh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nrh ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nrh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nrh OCA], [http://pdbe.org/5nrh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nrh RCSB], [http://www.ebi.ac.uk/pdbsum/5nrh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nrh ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DDL_BURP0 DDL_BURP0]] Cell wall formation.[HAMAP-Rule:MF_00047]
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[https://www.uniprot.org/uniprot/DDL_BURPS DDL_BURPS] Cell wall formation.[HAMAP-Rule:MF_00047]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus pseudomallei whitmore 1913]]
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[[Category: Burkholderia pseudomallei]]
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[[Category: D-alanine--D-alanine ligase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Diaz-Saez, L]]
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[[Category: Diaz-Saez L]]
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[[Category: Hunter, W N]]
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[[Category: Hunter WN]]
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[[Category: Complex]]
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[[Category: Ligase]]
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Revision as of 12:04, 22 November 2023

Crystal structure of Burkholderia pseudomallei D-alanine-D-alanine ligase in complex with AMP

PDB ID 5nrh

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