7dbf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:30, 29 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7dbf' size='340' side='right'caption='[[7dbf]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='7dbf' size='340' side='right'caption='[[7dbf]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7dbf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DBF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DBF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7dbf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DBF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DBF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Guanosine_deaminase Guanosine deaminase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.15 3.5.4.15] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dbf OCA], [https://pdbe.org/7dbf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dbf RCSB], [https://www.ebi.ac.uk/pdbsum/7dbf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dbf ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dbf OCA], [https://pdbe.org/7dbf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dbf RCSB], [https://www.ebi.ac.uk/pdbsum/7dbf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dbf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/GSDA_ARATH GSDA_ARATH]] Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.<ref>PMID:24130159</ref>
+
[https://www.uniprot.org/uniprot/GSDA_ARATH GSDA_ARATH] Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.<ref>PMID:24130159</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 7dbf" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7dbf" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Deaminase 3D structures|Deaminase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Guanosine deaminase]]
+
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jia, Q]]
+
[[Category: Jia Q]]
-
[[Category: Xie, W]]
+
[[Category: Xie W]]
-
[[Category: Zeng, H]]
+
[[Category: Zeng H]]
-
[[Category: Deamination]]
+
-
[[Category: Gsda]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Purine metabolism]]
+

Current revision

The structure of the Arabidopsis thaliana guanosine deaminase

PDB ID 7dbf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools