This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.




7dch

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:30, 29 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7dch' size='340' side='right'caption='[[7dch]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
<StructureSection load='7dch' size='340' side='right'caption='[[7dch]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7dch]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DCH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7dch]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Weissella_cibaria Weissella cibaria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DCH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.692&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AC1:6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL'>AC1</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AC1:6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL'>AC1</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7d9b|7d9b]], [[7d9c|7d9c]], [[7dcg|7dcg]]</div></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dch OCA], [https://pdbe.org/7dch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dch RCSB], [https://www.ebi.ac.uk/pdbsum/7dch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dch ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dch OCA], [https://pdbe.org/7dch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dch RCSB], [https://www.ebi.ac.uk/pdbsum/7dch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dch ProSAT]</span></td></tr>
</table>
</table>
Line 18: Line 17:
</div>
</div>
<div class="pdbe-citations 7dch" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7dch" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Alpha-glucosidase 3D structures|Alpha-glucosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 23: Line 25:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Hakoshima, T]]
+
[[Category: Weissella cibaria]]
-
[[Category: Kim, S]]
+
[[Category: Hakoshima T]]
-
[[Category: Krusong, K]]
+
[[Category: Kim S]]
-
[[Category: Mori, T]]
+
[[Category: Krusong K]]
-
[[Category: Wangpaiboon, K]]
+
[[Category: Mori T]]
-
[[Category: Carbohydrate]]
+
[[Category: Wangpaiboon K]]
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Glycoside hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Maltooligosaccharide]]
+

Current revision

Alpha-glucosidase from Weissella cibaria BBK-1 bound with acarbose

PDB ID 7dch

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools