7f2v

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Current revision (17:08, 29 November 2023) (edit) (undo)
 
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==Urate oxidase from Thermobispora bispora in apo form==
==Urate oxidase from Thermobispora bispora in apo form==
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<StructureSection load='7f2v' size='340' side='right'caption='[[7f2v]]' scene=''>
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<StructureSection load='7f2v' size='340' side='right'caption='[[7f2v]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7F2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7F2V FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7f2v]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermobispora_bispora_DSM_43833 Thermobispora bispora DSM 43833]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7F2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7F2V FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7f2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7f2v OCA], [https://pdbe.org/7f2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7f2v RCSB], [https://www.ebi.ac.uk/pdbsum/7f2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7f2v ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7f2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7f2v OCA], [https://pdbe.org/7f2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7f2v RCSB], [https://www.ebi.ac.uk/pdbsum/7f2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7f2v ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D6Y599_THEBD D6Y599_THEBD] Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.[PIRNR:PIRNR000241][RuleBase:RU004455]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Microbial urate oxidase has emerged as a potential source of therapeutic properties for hyperuricemia in arthritic gout and renal disease. The thermostability and long-term thermal tolerance of the enzyme need to be established to prolong its therapeutic effects. Here, we present the biochemical and structural aspects of a hyperthermostable urate oxidase (TbUox) from the thermophilic microorganism Thermobispora bispora. Enzymatic characterization of TbUox revealed that it was active over a wide range of temperatures, from 30 to 70 degrees C, with optimal activity at 65 degrees C and pH 8.0, which suggests its applicability under physiological conditions. Moreover, TbUox exhibits high thermostability from 10 to 65 degrees C, with Tm of 70.3 degrees C and near-neutral pH stability from pH 7.0 to 8.0 and high thermal tolerance. The crystal structures of TbUox revealed a distinct feature of the C-terminal loop extensions that may help with protein stability via inter-subunit interactions. In addition, the high thermal tolerance of TbUox may be contributed by the extensive inter-subunit contacts via salt bridges, hydrogen bonds, and hydrophobic interactions. The findings in this study provide a molecular basis for the thermophilic TbUox urate oxidase for application in hyperuricemia and gout therapy.
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Structural and biochemical insights into a hyperthermostable urate oxidase from Thermobispora bispora for hyperuricemia and gout therapy.,Chiu YC, Hsu TS, Huang CY, Hsu CH Int J Biol Macromol. 2021 Oct 1;188:914-923. doi: 10.1016/j.ijbiomac.2021.08.081., Epub 2021 Aug 14. PMID:34403675<ref>PMID:34403675</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7f2v" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Urate oxidase 3D structures|Urate oxidase 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Thermobispora bispora DSM 43833]]
[[Category: Chiu YC]]
[[Category: Chiu YC]]
[[Category: Hsu CH]]
[[Category: Hsu CH]]
[[Category: Hsu TS]]
[[Category: Hsu TS]]
[[Category: Huang CY]]
[[Category: Huang CY]]

Current revision

Urate oxidase from Thermobispora bispora in apo form

PDB ID 7f2v

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