7f3l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:08, 29 November 2023) (edit) (undo)
 
Line 1: Line 1:
-
====
+
==Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P62==
-
<StructureSection load='7f3l' size='340' side='right'caption='[[7f3l]]' scene=''>
+
<StructureSection load='7f3l' size='340' side='right'caption='[[7f3l]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7f3l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7F3L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7F3L FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7f3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7f3l OCA], [https://pdbe.org/7f3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7f3l RCSB], [https://www.ebi.ac.uk/pdbsum/7f3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7f3l ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7f3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7f3l OCA], [https://pdbe.org/7f3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7f3l RCSB], [https://www.ebi.ac.uk/pdbsum/7f3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7f3l ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YBOX2_HUMAN YBOX2_HUMAN] Major constituent of messenger ribonucleoprotein particles (mRNPs). Involved in the regulation of the stability and/or translation of germ cell mRNAs. Binds to Y-box consensus promoter element. Binds to full-length mRNA with high affinity in a sequence-independent manner. Binds to short RNA sequences containing the consensus site 5'-UCCAUCA-3' with low affinity and limited sequence specificity. Its binding with maternal mRNAs is necessary for its cytoplasmic retention. May mark specific mRNAs (those transcribed from Y-box promoters) in the nucleus for cytoplasmic storage, thereby linking transcription and mRNA storage/translational delay (By similarity).[UniProtKB:Q9Z2C8]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Z-disk]]
+
[[Category: Huang Y]]
 +
[[Category: Zhang Y]]

Current revision

Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P62

PDB ID 7f3l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools