7v6u
From Proteopedia
(Difference between revisions)
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==Crystal structure of bacterial peptidase== | ==Crystal structure of bacterial peptidase== | ||
| - | <StructureSection load='7v6u' size='340' side='right'caption='[[7v6u]]' scene=''> | + | <StructureSection load='7v6u' size='340' side='right'caption='[[7v6u]], [[Resolution|resolution]] 2.14Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7V6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7V6U FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7v6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7V6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7V6U FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7v6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7v6u OCA], [https://pdbe.org/7v6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7v6u RCSB], [https://www.ebi.ac.uk/pdbsum/7v6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7v6u ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.144Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MLT:D-MALATE'>MLT</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7v6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7v6u OCA], [https://pdbe.org/7v6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7v6u RCSB], [https://www.ebi.ac.uk/pdbsum/7v6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7v6u ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/MEPS_ECOLI MEPS_ECOLI] A murein DD-endopeptidase with specificity for D-Ala-meso-diaminopimelic acid (mDAP) cross-links. Its role is probably to cleave D-Ala-mDAP cross-links to allow insertion of new glycans and thus cell wall expansion. Functionally redundant with MepM and MepH. Also has weak LD-carboxypeptidase activity on L-mDAP-D-Ala peptide bonds. Partially suppresses a prc disruption mutant.<ref>PMID:23062283</ref> <ref>PMID:9158724</ref> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Escherichia coli K-12]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Kim Y]] | [[Category: Kim Y]] | ||
[[Category: Lee WC]] | [[Category: Lee WC]] | ||
Current revision
Crystal structure of bacterial peptidase
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