This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7vj6
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='7vj6' size='340' side='right'caption='[[7vj6]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='7vj6' size='340' side='right'caption='[[7vj6]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[7vj6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VJ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VJ6 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7vj6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei_Go1 Methanosarcina mazei Go1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VJ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VJ6 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vj6 OCA], [https://pdbe.org/7vj6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vj6 RCSB], [https://www.ebi.ac.uk/pdbsum/7vj6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vj6 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vj6 OCA], [https://pdbe.org/7vj6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vj6 RCSB], [https://www.ebi.ac.uk/pdbsum/7vj6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vj6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8PYK9_METMA Q8PYK9_METMA] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Deoxyribodipyrimidine photo-lyase]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Bessho | + | [[Category: Methanosarcina mazei Go1]] |
| - | [[Category: Chang | + | [[Category: Bessho Y]] |
| - | [[Category: Essen | + | [[Category: Chang Y-K]] |
| - | [[Category: Franz-Badur | + | [[Category: Essen L-O]] |
| - | [[Category: Gusti-Ngurah-Putu | + | [[Category: Franz-Badur S]] |
| - | [[Category: Huang | + | [[Category: Gusti-Ngurah-Putu E-P]] |
| - | [[Category: Huang | + | [[Category: Huang K-F]] |
| - | [[Category: Iwata | + | [[Category: Huang WC]] |
| - | [[Category: Joti | + | [[Category: Iwata S]] |
| - | [[Category: Kiontke | + | [[Category: Joti Y]] |
| - | [[Category: Lee | + | [[Category: Kiontke S]] |
| - | [[Category: Liao | + | [[Category: Lee C-C]] |
| - | [[Category: Maestre-Reyna | + | [[Category: Liao J-H]] |
| - | [[Category: Nango | + | [[Category: Maestre-Reyna M]] |
| - | [[Category: Owada | + | [[Category: Nango E]] |
| - | [[Category: Sugahara | + | [[Category: Owada S]] |
| - | [[Category: Tanaka | + | [[Category: Sugahara M]] |
| - | [[Category: Tono | + | [[Category: Tanaka R]] |
| - | [[Category: Tsai | + | [[Category: Tono K]] |
| - | [[Category: Wang | + | [[Category: Tsai M-D]] |
| - | [[Category: Weng | + | [[Category: Wang P-H]] |
| - | [[Category: Wu | + | [[Category: Weng J-H]] |
| - | [[Category: Wu | + | [[Category: Wu H-Y]] |
| - | [[Category: Yamamoto | + | [[Category: Wu W-J]] |
| - | [[Category: Yang | + | [[Category: Yamamoto J]] |
| - | + | [[Category: Yang C-H]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the semiquinone state
| |||||||||||
Categories: Large Structures | Methanosarcina mazei Go1 | Bessho Y | Chang Y-K | Essen L-O | Franz-Badur S | Gusti-Ngurah-Putu E-P | Huang K-F | Huang WC | Iwata S | Joti Y | Kiontke S | Lee C-C | Liao J-H | Maestre-Reyna M | Nango E | Owada S | Sugahara M | Tanaka R | Tono K | Tsai M-D | Wang P-H | Weng J-H | Wu H-Y | Wu W-J | Yamamoto J | Yang C-H
