2v4j
From Proteopedia
(Difference between revisions)
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<StructureSection load='2v4j' size='340' side='right'caption='[[2v4j]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='2v4j' size='340' side='right'caption='[[2v4j]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2v4j]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2v4j]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V4J FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SH0:3,3,3,3-[(1R,2S,3S,4S,7S,8S,11S,12S,13S,16S,19S)-3,8,13,17-TETRAKIS(CARBOXYLATOMETHYL)-8,13-DIMETHYL-1,2,3,4,7,8,11,12,13,16,19,20,22,24-TETRADECAHYDROPORPHYRIN-2,7,12,18-TETRAYL]TETRAPROPANOATE'>SH0</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene>, <scene name='pdbligand=SRM:SIROHEME'>SRM</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SH0:3,3,3,3-[(1R,2S,3S,4S,7S,8S,11S,12S,13S,16S,19S)-3,8,13,17-TETRAKIS(CARBOXYLATOMETHYL)-8,13-DIMETHYL-1,2,3,4,7,8,11,12,13,16,19,20,22,24-TETRADECAHYDROPORPHYRIN-2,7,12,18-TETRAYL]TETRAPROPANOATE'>SH0</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene>, <scene name='pdbligand=SRM:SIROHEME'>SRM</scene></td></tr> | |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v4j OCA], [https://pdbe.org/2v4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v4j RCSB], [https://www.ebi.ac.uk/pdbsum/2v4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v4j ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v4j OCA], [https://pdbe.org/2v4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v4j RCSB], [https://www.ebi.ac.uk/pdbsum/2v4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v4j ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/DSVA_DESVH DSVA_DESVH] Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Desulfovibrio vulgaris | + | [[Category: Desulfovibrio vulgaris str. Hildenborough]] |
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[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Archer | + | [[Category: Archer M]] |
- | [[Category: Matias | + | [[Category: Matias PM]] |
- | [[Category: Oliveira | + | [[Category: Oliveira TF]] |
- | [[Category: Pereira | + | [[Category: Pereira IAC]] |
- | [[Category: Venceslau | + | [[Category: Venceslau SS]] |
- | [[Category: Vonrhein | + | [[Category: Vonrhein C]] |
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Revision as of 08:11, 6 December 2023
THE CRYSTAL STRUCTURE OF Desulfovibrio vulgaris DISSIMILATORY SULFITE REDUCTASE BOUND TO DsrC PROVIDES NOVEL INSIGHTS INTO THE MECHANISM OF SULFATE RESPIRATION
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