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5od2

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Current revision (09:40, 6 December 2023) (edit) (undo)
 
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==Crystal structure of ADP-dependent glucokinase from Methanocaldococcus jannaschii==
==Crystal structure of ADP-dependent glucokinase from Methanocaldococcus jannaschii==
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<StructureSection load='5od2' size='340' side='right' caption='[[5od2]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
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<StructureSection load='5od2' size='340' side='right'caption='[[5od2]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5od2]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Metja Metja]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OD2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OD2 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5od2]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OD2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OD2 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5ID:(2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL'>5ID</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pfkC, glkA, MJ1604 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243232 METJA])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5ID:(2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL'>5ID</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5od2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5od2 OCA], [http://pdbe.org/5od2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5od2 RCSB], [http://www.ebi.ac.uk/pdbsum/5od2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5od2 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5od2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5od2 OCA], [https://pdbe.org/5od2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5od2 RCSB], [https://www.ebi.ac.uk/pdbsum/5od2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5od2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/K6PF_METJA K6PF_METJA]] Catalyzes the phosphorylation of fructose 6-phosphate and D-glucose to fructose 1,6-bisphosphate and D-glucose 6-phosphate, respectively, using ADP as the phosphate donor.
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[https://www.uniprot.org/uniprot/K6PF_METJA K6PF_METJA] Catalyzes the phosphorylation of fructose 6-phosphate and D-glucose to fructose 1,6-bisphosphate and D-glucose 6-phosphate, respectively, using ADP as the phosphate donor.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5od2" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5od2" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Phosphofructokinase 3D structures|Phosphofructokinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Metja]]
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[[Category: Large Structures]]
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[[Category: Grudnik, P]]
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[[Category: Methanocaldococcus jannaschii DSM 2661]]
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[[Category: Tokarz, P]]
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[[Category: Grudnik P]]
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[[Category: Wisniewska, M]]
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[[Category: Tokarz P]]
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[[Category: Protein-inhibitor complex]]
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[[Category: Wisniewska M]]
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[[Category: Sugar metabolism]]
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[[Category: Transferase]]
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Current revision

Crystal structure of ADP-dependent glucokinase from Methanocaldococcus jannaschii

PDB ID 5od2

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