8qyu
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil== | |
+ | <StructureSection load='8qyu' size='340' side='right'caption='[[8qyu]], [[Resolution|resolution]] 1.96Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8qyu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8QYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8QYU FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2OW:METHYL+4-(2-FLUORO-3-{[(6-METHYLPYRIDIN-3-YL)CARBAMOYL]AMINO}BENZYL)PIPERAZINE-1-CARBOXYLATE'>2OW</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene>, <scene name='pdbligand=VO4:VANADATE+ION'>VO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8qyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8qyu OCA], [https://pdbe.org/8qyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8qyu RCSB], [https://www.ebi.ac.uk/pdbsum/8qyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8qyu ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/MYH7_BOVIN MYH7_BOVIN] Muscle contraction. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Inherited cardiomyopathies are amongst the most common cardiac diseases worldwide, leading in the late-stage to heart failure and death. The most promising treatments against these diseases are small-molecules directly modulating the force produced by beta-cardiac myosin, the molecular motor driving heart contraction. Two of these molecules that produce antagonistic effects on cardiac contractility have completed clinical phase 3 trials: the activator Omecamtiv mecarbil and the inhibitor Mavacamten. In this work, we reveal by X-ray crystallography that both drugs target the same pocket and stabilize a pre-stroke structural state, with only few local differences. All atoms molecular dynamics simulations reveal how these molecules can have antagonistic impact on the allostery of the motor by comparing beta-cardiac myosin in the apo form or bound to Omecamtiv mecarbil or Mavacamten. Altogether, our results provide the framework for rational drug development for the purpose of personalized medicine. | ||
- | + | Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.,Auguin D, Robert-Paganin J, Rety S, Kikuti C, David A, Theumer G, Schmidt AW, Knolker HJ, Houdusse A bioRxiv. 2023 Nov 15:2023.11.15.567213. doi: 10.1101/2023.11.15.567213. Preprint. PMID:38014327<ref>PMID:38014327</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 8qyu" style="background-color:#fffaf0;"></div> |
- | [[Category: Auguin | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
- | [[Category: Robert-Paganin | + | [[Category: Bos taurus]] |
+ | [[Category: Large Structures]] | ||
+ | [[Category: Auguin D]] | ||
+ | [[Category: David A]] | ||
+ | [[Category: Houdusse A]] | ||
+ | [[Category: Kikuti C]] | ||
+ | [[Category: Rety S]] | ||
+ | [[Category: Robert-Paganin J]] |
Current revision
Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil
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Categories: Bos taurus | Large Structures | Auguin D | David A | Houdusse A | Kikuti C | Rety S | Robert-Paganin J