8qyu

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Current revision (11:47, 13 December 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8qyu is ON HOLD until Paper Publication
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==Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil==
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<StructureSection load='8qyu' size='340' side='right'caption='[[8qyu]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8qyu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8QYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8QYU FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2OW:METHYL+4-(2-FLUORO-3-{[(6-METHYLPYRIDIN-3-YL)CARBAMOYL]AMINO}BENZYL)PIPERAZINE-1-CARBOXYLATE'>2OW</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene>, <scene name='pdbligand=VO4:VANADATE+ION'>VO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8qyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8qyu OCA], [https://pdbe.org/8qyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8qyu RCSB], [https://www.ebi.ac.uk/pdbsum/8qyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8qyu ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MYH7_BOVIN MYH7_BOVIN] Muscle contraction.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Inherited cardiomyopathies are amongst the most common cardiac diseases worldwide, leading in the late-stage to heart failure and death. The most promising treatments against these diseases are small-molecules directly modulating the force produced by beta-cardiac myosin, the molecular motor driving heart contraction. Two of these molecules that produce antagonistic effects on cardiac contractility have completed clinical phase 3 trials: the activator Omecamtiv mecarbil and the inhibitor Mavacamten. In this work, we reveal by X-ray crystallography that both drugs target the same pocket and stabilize a pre-stroke structural state, with only few local differences. All atoms molecular dynamics simulations reveal how these molecules can have antagonistic impact on the allostery of the motor by comparing beta-cardiac myosin in the apo form or bound to Omecamtiv mecarbil or Mavacamten. Altogether, our results provide the framework for rational drug development for the purpose of personalized medicine.
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Authors: Robert-Paganin, J., Kikuti, C., Auguin, D., Rety, S., David, A., Houdusse, A.
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Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.,Auguin D, Robert-Paganin J, Rety S, Kikuti C, David A, Theumer G, Schmidt AW, Knolker HJ, Houdusse A bioRxiv. 2023 Nov 15:2023.11.15.567213. doi: 10.1101/2023.11.15.567213. Preprint. PMID:38014327<ref>PMID:38014327</ref>
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Description: Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: David, A]]
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<div class="pdbe-citations 8qyu" style="background-color:#fffaf0;"></div>
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[[Category: Auguin, D]]
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== References ==
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[[Category: Kikuti, C]]
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<references/>
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[[Category: Rety, S]]
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__TOC__
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[[Category: Houdusse, A]]
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</StructureSection>
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[[Category: Robert-Paganin, J]]
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[[Category: Bos taurus]]
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[[Category: Large Structures]]
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[[Category: Auguin D]]
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[[Category: David A]]
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[[Category: Houdusse A]]
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[[Category: Kikuti C]]
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[[Category: Rety S]]
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[[Category: Robert-Paganin J]]

Current revision

Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil

PDB ID 8qyu

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