1umz
From Proteopedia
(Difference between revisions)
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<StructureSection load='1umz' size='340' side='right'caption='[[1umz]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='1umz' size='340' side='right'caption='[[1umz]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1umz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1umz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremula Populus tremula]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UMZ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=XYS:XYLOPYRANOSE'>XYS</scene></td></tr> | |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1umz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1umz OCA], [https://pdbe.org/1umz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1umz RCSB], [https://www.ebi.ac.uk/pdbsum/1umz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1umz ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1umz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1umz OCA], [https://pdbe.org/1umz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1umz RCSB], [https://www.ebi.ac.uk/pdbsum/1umz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1umz ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/XTH34_POPPZ XTH34_POPPZ] Catalyzes xyloglucan endotransglycosylation (XET). Cleaves and religates xyloglucan polymers (PubMed:12595718, PubMed:15020748, PubMed:16014999, PubMed:15804235, PubMed:15125664). Does not catalyze xyloglucan endohydrolysis (XEH) (PubMed:15804235). Involved in early phases of secondary (S) cell wall formation in fibers of the xylem and phloem vascular tissues of wood stems. May play a role in restructuring primary cell walls, possibly creating and reinforcing the connections between the primary and S cell wall layers (PubMed:12468728). Functions in the gelatinous (G) layers of the tension wood fibers that are involved in bending of the wood stems. May play a role in G fiber shrinking by repairing broken xyloglucan cross-links between G and S2 cell wall layers via its XET activity to maintain connections between the layers (PubMed:17504814).<ref>PMID:12468728</ref> <ref>PMID:12595718</ref> <ref>PMID:15020748</ref> <ref>PMID:15125664</ref> <ref>PMID:15804235</ref> <ref>PMID:16014999</ref> <ref>PMID:17504814</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: European aspen]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Populus tremula]] |
- | [[Category: Brumer | + | [[Category: Brumer H]] |
- | [[Category: Denman | + | [[Category: Denman SE]] |
- | [[Category: Henriksson | + | [[Category: Henriksson H]] |
- | [[Category: Johansson | + | [[Category: Johansson P]] |
- | [[Category: Jones | + | [[Category: Jones TA]] |
- | [[Category: Kallas | + | [[Category: Kallas AM]] |
- | [[Category: Teeri | + | [[Category: Teeri TT]] |
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Revision as of 12:51, 13 December 2023
Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
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