2vgr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:19, 13 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2vgr' size='340' side='right'caption='[[2vgr]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2vgr' size='340' side='right'caption='[[2vgr]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2vgr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpprm Bpprm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VGR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VGR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2vgr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Prochlorococcus_phage_P-SSM2 Prochlorococcus phage P-SSM2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VGR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VGR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2vck|2vck]], [[2vcl|2vcl]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phycoerythrobilin_synthase Phycoerythrobilin synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.7.6 1.3.7.6] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vgr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vgr OCA], [https://pdbe.org/2vgr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vgr RCSB], [https://www.ebi.ac.uk/pdbsum/2vgr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vgr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vgr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vgr OCA], [https://pdbe.org/2vgr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vgr RCSB], [https://www.ebi.ac.uk/pdbsum/2vgr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vgr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/PEBS_BPPRM PEBS_BPPRM]] Plays a role in phycoerythrobilin biosynthesis, the red pigment chromophore photosynthetically active biliproteins of the host cyanobacteria. Uses a four-electron reduction to carry out the reactions catalyzed by two enzymes (EC 1.3.7.2 and EC 1.3.7.3) in host.
+
[https://www.uniprot.org/uniprot/PEBS_BPPRM PEBS_BPPRM] Plays a role in phycoerythrobilin biosynthesis, the red pigment chromophore photosynthetically active biliproteins of the host cyanobacteria. Uses a four-electron reduction to carry out the reactions catalyzed by two enzymes (EC 1.3.7.2 and EC 1.3.7.3) in host.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bpprm]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phycoerythrobilin synthase]]
+
[[Category: Prochlorococcus phage P-SSM2]]
-
[[Category: Dammeyer, T]]
+
[[Category: Dammeyer T]]
-
[[Category: Frankenberg-Dinkel, N]]
+
[[Category: Frankenberg-Dinkel N]]
-
[[Category: Hofmann, E]]
+
[[Category: Hofmann E]]
-
[[Category: Biliverdin ixa]]
+
-
[[Category: Biliverdin reductase]]
+
-
[[Category: Cyanophage]]
+
-
[[Category: Ferredoxin dependent]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Phycobilin reductase]]
+
-
[[Category: Phycobilin synthesis]]
+
-
[[Category: Phycoerythrobilin]]
+
-
[[Category: Prochlorococcus]]
+

Current revision

Structure of the WT-Phycoerythrobilin Synthase PebS from the Cyanophage P-SSM2 in Complex with the bound Substrate Biliverdin IXa

PDB ID 2vgr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools