2w6y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:46, 13 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2w6y' size='340' side='right'caption='[[2w6y]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='2w6y' size='340' side='right'caption='[[2w6y]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2w6y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Phycd Phycd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W6Y OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2W6Y FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2w6y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W6Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W6Y FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1cik|1cik]], [[103m|103m]], [[1bvc|1bvc]], [[4mbn|4mbn]], [[1vxb|1vxb]], [[112m|112m]], [[2evp|2evp]], [[1mtk|1mtk]], [[2mge|2mge]], [[1yoh|1yoh]], [[2mgc|2mgc]], [[1f65|1f65]], [[1jdo|1jdo]], [[1lue|1lue]], [[2g0v|2g0v]], [[2blj|2blj]], [[1tes|1tes]], [[1dxc|1dxc]], [[2spl|2spl]], [[2d6c|2d6c]], [[1mlh|1mlh]], [[2w6w|2w6w]], [[1mlm|1mlm]], [[1mbn|1mbn]], [[1mlj|1mlj]], [[2mgi|2mgi]], [[2bwh|2bwh]], [[1myz|1myz]], [[1n9f|1n9f]], [[1jpb|1jpb]], [[2g0s|2g0s]], [[1mls|1mls]], [[1mbd|1mbd]], [[1mti|1mti]], [[106m|106m]], [[1mlo|1mlo]], [[1do3|1do3]], [[1cpw|1cpw]], [[101m|101m]], [[2g0x|2g0x]], [[1vxd|1vxd]], [[1l2k|1l2k]], [[2bli|2bli]], [[1jp9|1jp9]], [[1mlg|1mlg]], [[2mgg|2mgg]], [[1ch9|1ch9]], [[2mbw|2mbw]], [[1vxf|1vxf]], [[1u7s|1u7s]], [[2mgj|2mgj]], [[111m|111m]], [[2blh|2blh]], [[1mbi|1mbi]], [[105m|105m]], [[1vxh|1vxh]], [[1mln|1mln]], [[1h1x|1h1x]], [[1cp5|1cp5]], [[1f6h|1f6h]], [[1do1|1do1]], [[1n9h|1n9h]], [[1spe|1spe]], [[1myf|1myf]], [[1mll|1mll]], [[1a6g|1a6g]], [[1mbo|1mbo]], [[1ch5|1ch5]], [[102m|102m]], [[1yoi|1yoi]], [[1ltw|1ltw]], [[2w6x|2w6x]], [[2spm|2spm]], [[2g0z|2g0z]], [[1bvd|1bvd]], [[1hjt|1hjt]], [[1wvp|1wvp]], [[2myb|2myb]], [[1do4|1do4]], [[1moa|1moa]], [[1ebc|1ebc]], [[1ch1|1ch1]], [[1mym|1mym]], [[1mlk|1mlk]], [[1mlq|1mlq]], [[1mgn|1mgn]], [[1mlf|1mlf]], [[2spn|2spn]], [[1ch3|1ch3]], [[1ch7|1ch7]], [[5mbn|5mbn]], [[1cq2|1cq2]], [[1fcs|1fcs]], [[1moc|1moc]], [[1do7|1do7]], [[2mgh|2mgh]], [[2mb5|2mb5]], [[1cio|1cio]], [[1mbc|1mbc]], [[2g0r|2g0r]], [[1yog|1yog]], [[1jp6|1jp6]], [[1u7r|1u7r]], [[1ofj|1ofj]], [[2g10|2g10]], [[1cp0|1cp0]], [[1ajh|1ajh]], [[109m|109m]], [[2g14|2g14]], [[2bw9|2bw9]], [[1duk|1duk]], [[1vxa|1vxa]], [[2mye|2mye]], [[1n9i|1n9i]], [[1mz0|1mz0]], [[1dxd|1dxd]], [[1bzr|1bzr]], [[1dti|1dti]], [[1mcy|1mcy]], [[1f63|1f63]], [[1abs|1abs]], [[2mgf|2mgf]], [[1vxg|1vxg]], [[1swm|1swm]], [[110m|110m]], [[2g12|2g12]], [[1a6n|1a6n]], [[1n9x|1n9x]], [[1ofk|1ofk]], [[2myc|2myc]], [[1dtm|1dtm]], [[1ufp|1ufp]], [[2spo|2spo]], [[2mgb|2mgb]], [[2mgm|2mgm]], [[1jw8|1jw8]], [[1o16|1o16]], [[1vxc|1vxc]], [[1a6k|1a6k]], [[2mga|2mga]], [[1mlr|1mlr]], [[1irc|1irc]], [[1vxe|1vxe]], [[1ajg|1ajg]], [[2mgl|2mgl]], [[1mtj|1mtj]], [[1mlu|1mlu]], [[2mya|2mya]], [[1obm|1obm]], [[1co9|1co9]], [[1a6m|1a6m]], [[1co8|1co8]], [[2cmm|2cmm]], [[107m|107m]], [[108m|108m]], [[1naz|1naz]], [[2myd|2myd]], [[2jho|2jho]], [[1ch2|1ch2]], [[2g11|2g11]], [[104m|104m]], [[1duo|1duo]], [[1jp8|1jp8]], [[2mgd|2mgd]], [[1mod|1mod]], [[1j3f|1j3f]], [[1j52|1j52]], [[1iop|1iop]], [[1bz6|1bz6]], [[1mob|1mob]], [[1bzp|1bzp]], [[2mgk|2mgk]], [[1ufj|1ufj]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2w6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w6y OCA], [http://pdbe.org/2w6y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w6y RCSB], [http://www.ebi.ac.uk/pdbsum/2w6y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w6y ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w6y OCA], [https://pdbe.org/2w6y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w6y RCSB], [https://www.ebi.ac.uk/pdbsum/2w6y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w6y ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC]] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
+
[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 27: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phycd]]
+
[[Category: Physeter catodon]]
-
[[Category: Brunori, M]]
+
[[Category: Brunori M]]
-
[[Category: Draghi, F]]
+
[[Category: Draghi F]]
-
[[Category: Johnson, K A]]
+
[[Category: Johnson KA]]
-
[[Category: Miele, A E]]
+
[[Category: Miele AE]]
-
[[Category: Renzi, F]]
+
[[Category: Renzi F]]
-
[[Category: Savino, C]]
+
[[Category: Savino C]]
-
[[Category: Sciara, G]]
+
[[Category: Sciara G]]
-
[[Category: Vallone, B]]
+
[[Category: Vallone B]]
-
[[Category: Heme]]
+
-
[[Category: Hydrophobic cavity]]
+
-
[[Category: Iron]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Muscle protein]]
+
-
[[Category: Oxygen storage]]
+
-
[[Category: Oxygen transport]]
+
-
[[Category: Transport]]
+
-
[[Category: Xenon docking site]]
+

Current revision

Crystal structure of Sperm Whale Myoglobin mutant YQR in complex with Xenon

PDB ID 2w6y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools