5olk

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Current revision (16:53, 13 December 2023) (edit) (undo)
 
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==Crystal structure of the ATP-cone-containing NrdB from Leeuwenhoekiella blandensis==
==Crystal structure of the ATP-cone-containing NrdB from Leeuwenhoekiella blandensis==
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<StructureSection load='5olk' size='340' side='right' caption='[[5olk]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
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<StructureSection load='5olk' size='340' side='right'caption='[[5olk]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5olk]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Flavobacteria_sp._med217 Flavobacteria sp. med217]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OLK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OLK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5olk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Leeuwenhoekiella_blandensis_MED217 Leeuwenhoekiella blandensis MED217]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OLK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OLK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DTP:2-DEOXYADENOSINE+5-TRIPHOSPHATE'>DTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MED217_17135 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=398720 Flavobacteria sp. MED217])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTP:2-DEOXYADENOSINE+5-TRIPHOSPHATE'>DTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonucleoside-diphosphate_reductase Ribonucleoside-diphosphate reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.4.1 1.17.4.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5olk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5olk OCA], [https://pdbe.org/5olk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5olk RCSB], [https://www.ebi.ac.uk/pdbsum/5olk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5olk ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5olk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5olk OCA], [http://pdbe.org/5olk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5olk RCSB], [http://www.ebi.ac.uk/pdbsum/5olk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5olk ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A3XHF9_LEEBM A3XHF9_LEEBM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Flavobacteria sp. med217]]
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[[Category: Large Structures]]
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[[Category: Ribonucleoside-diphosphate reductase]]
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[[Category: Leeuwenhoekiella blandensis MED217]]
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[[Category: Grinberg, A R]]
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[[Category: Grinberg AR]]
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[[Category: Hasan, M]]
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[[Category: Hasan M]]
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[[Category: Logan, D T]]
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[[Category: Logan DT]]
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[[Category: Sjoberg, B M]]
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[[Category: Sjoberg BM]]
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[[Category: Oxidoreductase]]
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[[Category: Ribonucleotide reductase atp cone allosteric regulation oligomerization]]
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Current revision

Crystal structure of the ATP-cone-containing NrdB from Leeuwenhoekiella blandensis

PDB ID 5olk

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