1p13

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[[Image:1p13.jpg|left|200px]]
[[Image:1p13.jpg|left|200px]]
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{{Structure
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|PDB= 1p13 |SIZE=350|CAPTION= <scene name='initialview01'>1p13</scene>, resolution 1.63&Aring;
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The line below this paragraph, containing "STRUCTURE_1p13", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND= <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>
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|GENE= SRC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 Gallus gallus])
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|DOMAIN=
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{{STRUCTURE_1p13| PDB=1p13 | SCENE= }}
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|RELATEDENTRY=[[1p15|1P15]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1p13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p13 OCA], [http://www.ebi.ac.uk/pdbsum/1p13 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1p13 RCSB]</span>
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'''Crystal Structure of the Src SH2 Domain Complexed with Peptide (SDpYANFK)'''
'''Crystal Structure of the Src SH2 Domain Complexed with Peptide (SDpYANFK)'''
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[[Category: Noel, J P.]]
[[Category: Noel, J P.]]
[[Category: Sonnenburg, E D.]]
[[Category: Sonnenburg, E D.]]
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[[Category: phosphorylation]]
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[[Category: Phosphorylation]]
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[[Category: sh3 domain]]
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[[Category: Sh3 domain]]
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[[Category: tyrosine-protein kinase]]
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[[Category: Tyrosine-protein kinase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 04:32:57 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:53:17 2008''
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Revision as of 01:32, 3 May 2008

Template:STRUCTURE 1p13

Crystal Structure of the Src SH2 Domain Complexed with Peptide (SDpYANFK)


Overview

The receptor protein tyrosine phosphatase alpha (RPTPalpha) is a transmembrane receptor with two intracellular protein tyrosine phosphatase domains, a catalytically active membrane proximal domain (D1) and a membrane distal phosphatase domain with minimal catalytic activity (D2). Here we elucidate the crystal structure of RPTPalpha's D2 domain. Unlike D1, D2 exists as a monomer and lacks the N-terminal inhibitory wedge motif. The N-terminal portion of D2 is disordered, and this region linking D1 to D2 is proteolytically labile in solution whether part of D2 alone or tethered to D1, indicating that the polypeptide backbone of this part of D2 is highly flexible, and therefore accessible to proteases under native conditions. Furthermore, we have crystallized the SH2 domain of the protein tyrosine kinase c-Src, a RPTPalpha substrate, with a phosphopeptide encompassing the C-terminal phosphorylation site of D2 (pTyr789). The SH2 domain of Src binds RPTPalpha in an extended conformation. The structural and functional data support a D1-D2 arrangement with significant flexibility between phosphatase domains of RPTPalpha that is likely to be important for dynamic alterations in intra- and/or intermolecular interactions that are critical for RPTPalpha function.

About this Structure

1P13 is a Single protein structure of sequence from Gallus gallus. Full crystallographic information is available from OCA.

Reference

The structure of the membrane distal phosphatase domain of RPTPalpha reveals interdomain flexibility and an SH2 domain interaction region., Sonnenburg ED, Bilwes A, Hunter T, Noel JP, Biochemistry. 2003 Jul 8;42(26):7904-14. PMID:12834342 Page seeded by OCA on Sat May 3 04:32:57 2008

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