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| <StructureSection load='2x3u' size='340' side='right'caption='[[2x3u]], [[Resolution|resolution]] 1.93Å' scene=''> | | <StructureSection load='2x3u' size='340' side='right'caption='[[2x3u]], [[Resolution|resolution]] 1.93Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2x3u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena_pcc7119 Anabaena pcc7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X3U FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2x3u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7119 Nostoc sp. PCC 7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X3U FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1qgy|1qgy]], [[1h85|1h85]], [[1h42|1h42]], [[1qh0|1qh0]], [[2bmw|2bmw]], [[1go2|1go2]], [[1qgz|1qgz]], [[1ogj|1ogj]], [[1b2r|1b2r]], [[1gjr|1gjr]], [[1ewy|1ewy]], [[2vyq|2vyq]], [[1que|1que]], [[1w34|1w34]], [[1w87|1w87]], [[1e64|1e64]], [[1quf|1quf]], [[2bsa|2bsa]], [[1ogi|1ogi]], [[1gr1|1gr1]], [[2vzl|2vzl]], [[1bjk|1bjk]], [[1w35|1w35]], [[1e63|1e63]], [[1bqe|1bqe]], [[1e62|1e62]]</div></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
| + | |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x3u OCA], [https://pdbe.org/2x3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x3u RCSB], [https://www.ebi.ac.uk/pdbsum/2x3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x3u ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x3u OCA], [https://pdbe.org/2x3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x3u RCSB], [https://www.ebi.ac.uk/pdbsum/2x3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x3u ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/FENR_NOSSO FENR_NOSSO] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Anabaena pcc7119]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Herguedas, B]] | + | [[Category: Nostoc sp. PCC 7119]] |
- | [[Category: Hermoso, J A]] | + | [[Category: Herguedas B]] |
- | [[Category: Martinez-Julvez, M]] | + | [[Category: Hermoso JA]] |
- | [[Category: Medina, M]] | + | [[Category: Martinez-Julvez M]] |
- | [[Category: Peregrina, J R]] | + | [[Category: Medina M]] |
- | [[Category: Sanchez-Azqueta, A]] | + | [[Category: Peregrina JR]] |
- | [[Category: Flavoprotein]]
| + | [[Category: Sanchez-Azqueta A]] |
- | [[Category: Oxidoreductase]]
| + | |
| Structural highlights
Function
FENR_NOSSO
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Two transient charge-transfer complexes (CTC) form prior and upon hydride transfer (HT) in the reversible reaction of the FAD-dependent ferredoxin-NADP(+) reductase (FNR) with NADP(+)/H, FNR(ox)-NADPH (CTC-1), and FNR(rd)-NADP(+) (CTC-2). Spectral properties of both CTCs, as well as the corresponding interconversion HT rates, are here reported for several Anabaena FNR site-directed mutants. The need for an adequate initial interaction between the 2'P-AMP portion of NADP(+)/H and FNR that provides subsequent conformational changes leading to CTC formation is further confirmed. Stronger interactions between the isoalloxazine and nicotinamide rings might relate with faster HT processes, but exceptions are found upon distortion of the active centre. Thus, within the analyzed FNR variants, there is no strict correlation between the stability of the transient CTCs formation and the rate of the subsequent HT. Kinetic isotope effects suggest that, while in the WT, vibrational enhanced modulation of the active site contributes to the tunnel probability of HT; complexes of some of the active site mutants with the coenzyme hardly allow the relative movement of isoalloxazine and nicotinamide rings along the HT reaction. The architecture of the WT FNR active site precisely contributes to reduce the stacking probability between the isoalloxazine and nicotinamide rings in the catalytically competent complex, modulating the angle and distance between the N5 of the FAD isoalloxazine and the C4 of the coenzyme nicotinamide to values that ensure efficient HT processes.
Role of specific residues in coenzyme binding, charge-transfer complex formation, and catalysis in Anabaena ferredoxin NADP(+)-reductase.,Peregrina JR, Sanchez-Azqueta A, Herguedas B, Martinez-Julvez M, Medina M Biochim Biophys Acta. 2010 Sep;1797(9):1638-1646. Epub 2010 May 21. PMID:20471952[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Peregrina JR, Sanchez-Azqueta A, Herguedas B, Martinez-Julvez M, Medina M. Role of specific residues in coenzyme binding, charge-transfer complex formation, and catalysis in Anabaena ferredoxin NADP(+)-reductase. Biochim Biophys Acta. 2010 Sep;1797(9):1638-1646. Epub 2010 May 21. PMID:20471952 doi:10.1016/j.bbabio.2010.05.006
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