2y1i

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Current revision (10:43, 20 December 2023) (edit) (undo)
 
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<StructureSection load='2y1i' size='340' side='right'caption='[[2y1i]], [[Resolution|resolution]] 2.78&Aring;' scene=''>
<StructureSection load='2y1i' size='340' side='right'caption='[[2y1i]], [[Resolution|resolution]] 2.78&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2y1i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y1I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Y1I FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2y1i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y1I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Y1I FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.78&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PBT:[3-HYDROXY-5-(5-METHYL-2,4-DIOXOTETRAHYDRO-1(2H)-PYRIMIDINYL)TETRAHYDRO-2-FURANYL]METHYL+DIHYDROGEN+PHOSPHATE'>PBT</scene>, <scene name='pdbligand=THM:THYMIDINE'>THM</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PBT:[3-HYDROXY-5-(5-METHYL-2,4-DIOXOTETRAHYDRO-1(2H)-PYRIMIDINYL)TETRAHYDRO-2-FURANYL]METHYL+DIHYDROGEN+PHOSPHATE'>PBT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=THM:THYMIDINE'>THM</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2y1j|2y1j]]</div></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y1i OCA], [https://pdbe.org/2y1i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y1i RCSB], [https://www.ebi.ac.uk/pdbsum/2y1i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y1i ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y1i OCA], [https://pdbe.org/2y1i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y1i RCSB], [https://www.ebi.ac.uk/pdbsum/2y1i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y1i ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/E1C9K5_GEOSE E1C9K5_GEOSE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 2y1i" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2y1i" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 12980]]
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[[Category: Geobacillus stearothermophilus]]
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[[Category: DNA-directed DNA polymerase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Carell, T]]
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[[Category: Synthetic construct]]
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[[Category: Heil, K]]
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[[Category: Carell T]]
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[[Category: Kneuttinger, A C]]
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[[Category: Heil K]]
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[[Category: Mueller, M]]
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[[Category: Kneuttinger AC]]
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[[Category: Schneider, S]]
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[[Category: Mueller M]]
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[[Category: Dna repair]]
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[[Category: Schneider S]]
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[[Category: Photolesion]]
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[[Category: Spore photoproduct]]
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[[Category: Transferase-dna complex]]
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[[Category: Uv lesion]]
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Current revision

Crystal structure of a S-diastereomer analogue of the spore photoproduct in complex with fragment DNA polymerase I from Bacillus stearothermophilus

PDB ID 2y1i

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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