4ar2

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Current revision (11:33, 20 December 2023) (edit) (undo)
 
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<StructureSection load='4ar2' size='340' side='right'caption='[[4ar2]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
<StructureSection load='4ar2' size='340' side='right'caption='[[4ar2]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4ar2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ade03 Ade03]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AR2 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4ar2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_adenovirus_B3 Human adenovirus B3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AR2 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.8&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1qhv|1qhv]], [[1qiu|1qiu]], [[1v1h|1v1h]], [[1v1i|1v1i]], [[2c9f|2c9f]], [[4aqq|4aqq]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ar2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar2 OCA], [https://pdbe.org/4ar2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ar2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ar2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ar2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ar2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar2 OCA], [https://pdbe.org/4ar2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ar2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ar2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ar2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/SPIKE_ADE02 SPIKE_ADE02]] Forms spikes that protrude from each vertex of the icosahedral capsid. Interacts with host coxsackievirus and adenovirus receptor CXADR located at the cell tight junctions to provide virion initial attachment to target cell. The fiber protein binds to CXADR with a higher affinity than CXADR binds to itself, thereby blocking the cell-cell adhesion function of CXADR dimers and leading to local disruption of the tight junction. Fiber protein present on neo-synthesized particles may thus disrupt the junctional integrity in order to facilitate further neighboring cells infection. Fiber proteins are shed during virus entry, when virus is still at the cell surface. Fiber shedding is dependent on viral CXADR drifting motion and subsequent binding to immobile integrins. Heparan sulfate might also play a role in virus binding.<ref>PMID:10704346</ref> <ref>PMID:12297051</ref> <ref>PMID:21843868</ref> <ref>PMID:9525681</ref>
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[https://www.uniprot.org/uniprot/Q2Y0H9_ADE03 Q2Y0H9_ADE03]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ade03]]
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[[Category: Human adenovirus B3]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Andreev, I]]
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[[Category: Andreev I]]
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[[Category: Andrieu, J P]]
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[[Category: Andrieu J-P]]
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[[Category: Burmeister, W P]]
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[[Category: Burmeister WP]]
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[[Category: Chroboczek, J]]
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[[Category: Chroboczek J]]
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[[Category: Cusack, S]]
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[[Category: Cusack S]]
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[[Category: Fender, P]]
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[[Category: Fender P]]
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[[Category: Naskalska, A]]
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[[Category: Naskalska A]]
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[[Category: Nerlo, B]]
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[[Category: Nerlo B]]
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[[Category: Schoehn, G]]
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[[Category: Schoehn G]]
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[[Category: Szolajska, E]]
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[[Category: Szolajska E]]
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[[Category: Zochowska, M]]
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[[Category: Zochowska M]]
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[[Category: Zubieta, C]]
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[[Category: Zubieta C]]
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[[Category: Capsid protein]]
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[[Category: Dodecahedron]]
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[[Category: Dsdna virus]]
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[[Category: Strand swapping]]
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[[Category: Viral protein]]
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[[Category: Virus-like particle]]
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Current revision

Dodecahedron formed of penton base protein from adenovirus Ad3

PDB ID 4ar2

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