4as3

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Revision as of 11:34, 20 December 2023

Pseudomonas Aeruginosa Phosphorylcholine Phosphatase. Orthorhombic form

Structural highlights

4as3 is a 4 chain structure with sequence from Pseudomonas aeruginosa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2.4Å
Ligands:	, ,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PCHP_PSEAE Catalyzes the hydrolysis of phosphorylcholine (PCho) to produce choline and inorganic phosphate (PubMed:2116592, PubMed:10387109, PubMed:15886911, PubMed:17106798). Can also hydrolyze phosphorylethanolamine and the nonphysiological substrate p-nitrophenylphosphate (pNPP) (PubMed:2116592, PubMed:10387109, PubMed:15886911, PubMed:17106798). Shows higher affinity and catalytic efficiency with phosphorylcholine as substrate (PubMed:2116592).^[1] ^[2] ^[3] ^[4] Is probably involved in virulence (PubMed:19103776, Ref.3). The bacteria may break down various host compounds or host cell membranes through the coordinated action of phospholipase C and phosphocholine phosphatase. The final consequence of the action of these enzymes is an increase of the free choline concentration, which may promote the pathogenicity of P.aeruginosa (Ref.3).^[5] ^[6]

Publication Abstract from PubMed

Pseudomonas aeruginosa is an opportunistic Gram-negative pathogen. It colonizes different tissues by the utilization of diverse mechanisms. One of these may involve the breakdown of the host cell membrane through the sequential action of hemolytic phospholipase C and phosphorylcholine phosphatase (PchP). The action of hemolytic phospholipase C on phosphatidylcholine produces phosphorylcholine, which is hydrolyzed to choline (Cho) and inorganic phosphate by PchP. The available biochemical data on this enzyme demonstrate the involvement of two Cho-binding sites in the catalytic cycle and in enzyme regulation. The crystal structure of P. aeruginosa PchP has been determined. It folds into three structural domains. The first domain harbors all the residues involved in catalysis and is well conserved among the haloacid dehalogenase superfamily of proteins. The second domain is characteristic of PchP and is involved in the recognition of the Cho moiety of the substrate. The third domain stabilizes the relative position of the other two. Fortuitously, the crystal structure of PchP captures molecules of Bistris (2-[bis(2-hydroxyethyl)amino]-2-(hydroxymethyl)propane-1,3-diol) at the active site and at an additional site. This represents two catalytically relevant complexes with just one or two inhibitory Bistris molecules and provides the basis of the PchP function and regulation. Site-directed mutagenesis along with biochemical experiments corroborates the structural observations and demonstrates the interplay between different sites for Cho recognition and inhibition. The structural comparison of PchP with other phosphatases of the haloacid dehalogenase family provides a three-dimensional picture of the conserved catalytic cycle and the structural basis for the recognition of the diverse substrate molecules.

The Structural Domains of Pseudomonas aeruginosa Phosphorylcholine Phosphatase Cooperate in Substrate Hydrolysis: 3D Structure and Enzymatic Mechanism.,Infantes L, Otero LH, Beassoni PR, Boetsch C, Lisa AT, Domenech CE, Albert A J Mol Biol. 2012 Aug 21. pii: S0022-2836(12)00608-0. doi:, 10.1016/j.jmb.2012.07.024. PMID:22922065^[7]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Salvano MA, Domenech CE. Kinetic properties of purified Pseudomonas aeruginosa phosphorylcholine phosphatase indicated that this enzyme may be utilized by the bacteria to colonize in different environments. Curr Microbiol. 1999 Jul;39(1):1-8. PMID:10387109 doi:10.1007/pl00006819
↑ Massimelli MJ, Beassoni PR, Forrellad MA, Barra JL, Garrido MN, Domenech CE, Lisa AT. Identification, cloning, and expression of Pseudomonas aeruginosa phosphorylcholine phosphatase gene. Curr Microbiol. 2005 May;50(5):251-6. PMID:15886911 doi:10.1007/s00284-004-4499-9
↑ Beassoni PR, Otero LH, Massimelli MJ, Lisa AT, Domenech CE. Critical active-site residues identified by site-directed mutagenesis in Pseudomonas aeruginosa phosphorylcholine phosphatase, a new member of the haloacid dehalogenases hydrolase superfamily. Curr Microbiol. 2006 Dec;53(6):534-9. PMID:17106798 doi:10.1007/s00284-006-0365-2
↑ Garrido MN, Lisa TA, Albelo S, Lucchesi GI, Domenech CE. Identification of the Pseudomonas aeruginosa acid phosphatase as a phosphorylcholine phosphatase activity. Mol Cell Biochem. 1990 Apr 18;94(1):89-95. PMID:2116592 doi:10.1007/BF00223566
↑ Wargo MJ, Ho TC, Gross MJ, Whittaker LA, Hogan DA. GbdR regulates Pseudomonas aeruginosa plcH and pchP transcription in response to choline catabolites. Infect Immun. 2009 Mar;77(3):1103-11. PMID:19103776 doi:10.1128/IAI.01008-08
↑ Massimelli MJ, Beassoni PR, Forrellad MA, Barra JL, Garrido MN, Domenech CE, Lisa AT. Identification, cloning, and expression of Pseudomonas aeruginosa phosphorylcholine phosphatase gene. Curr Microbiol. 2005 May;50(5):251-6. PMID:15886911 doi:10.1007/s00284-004-4499-9
↑ Infantes L, Otero LH, Beassoni PR, Boetsch C, Lisa AT, Domenech CE, Albert A. The Structural Domains of Pseudomonas aeruginosa Phosphorylcholine Phosphatase Cooperate in Substrate Hydrolysis: 3D Structure and Enzymatic Mechanism. J Mol Biol. 2012 Aug 21. pii: S0022-2836(12)00608-0. doi:, 10.1016/j.jmb.2012.07.024. PMID:22922065 doi:http://dx.doi.org/10.1016/j.jmb.2012.07.024

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4as3"

Categories: Large Structures | Pseudomonas aeruginosa | Albert A | Infantes L | Otero LH

@@ Line 3: / Line 3: @@
 <StructureSection load='4as3' size='340' side='right'caption='[[4as3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4as3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AS3 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4as3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AS3 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4as2|4as2]]</div></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoethanolamine/phosphocholine_phosphatase Phosphoethanolamine/phosphocholine phosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.75 3.1.3.75] </span></td></tr>
 <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4as3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4as3 OCA], [https://pdbe.org/4as3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4as3 RCSB], [https://www.ebi.ac.uk/pdbsum/4as3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4as3 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/PCHP_PSEAE PCHP_PSEAE] Catalyzes the hydrolysis of phosphorylcholine (PCho) to produce choline and inorganic phosphate (PubMed:2116592, PubMed:10387109, PubMed:15886911, PubMed:17106798). Can also hydrolyze phosphorylethanolamine and the nonphysiological substrate p-nitrophenylphosphate (pNPP) (PubMed:2116592, PubMed:10387109, PubMed:15886911, PubMed:17106798). Shows higher affinity and catalytic efficiency with phosphorylcholine as substrate (PubMed:2116592).<ref>PMID:10387109</ref> <ref>PMID:15886911</ref> <ref>PMID:17106798</ref> <ref>PMID:2116592</ref>   Is probably involved in virulence (PubMed:19103776, Ref.3). The bacteria may break down various host compounds or host cell membranes through the coordinated action of phospholipase C and phosphocholine phosphatase. The final consequence of the action of these enzymes is an increase of the free choline concentration, which may promote the pathogenicity of P.aeruginosa (Ref.3).<ref>PMID:19103776</ref> <ref>PMID:15886911</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 23: / Line 24: @@
 </StructureSection>
 [[Category: Large Structures]]
-[[Category: Phosphoethanolamine/phosphocholine phosphatase]]
+[[Category: Pseudomonas aeruginosa]]
-[[Category: Albert, A]]
+[[Category: Albert A]]
-[[Category: Infantes, L]]
+[[Category: Infantes L]]
-[[Category: Otero, L H]]
+[[Category: Otero LH]]
-[[Category: Alkylammonium compound]]
-[[Category: Had superfamily]]
-[[Category: Hydrolase]]

4as3

From Proteopedia

Revision as of 11:34, 20 December 2023

Pseudomonas Aeruginosa Phosphorylcholine Phosphatase. Orthorhombic form

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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