4az0

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Current revision (11:39, 20 December 2023) (edit) (undo)
 
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<StructureSection load='4az0' size='340' side='right'caption='[[4az0]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
<StructureSection load='4az0' size='340' side='right'caption='[[4az0]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4az0]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AZ0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4az0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AZ0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=S61:(S)-3-{[1-(2-FLUORO-PHENYL)-5-HYDROXY-1H-PYRAZOLE-3-CARBONYL]-AMINO}-3-O-TOLYL-PROPIONIC+ACID'>S61</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.17&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ivy|1ivy]], [[4az3|4az3]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=S61:(S)-3-{[1-(2-FLUORO-PHENYL)-5-HYDROXY-1H-PYRAZOLE-3-CARBONYL]-AMINO}-3-O-TOLYL-PROPIONIC+ACID'>S61</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Carboxypeptidase_C Carboxypeptidase C], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.5 3.4.16.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4az0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4az0 OCA], [https://pdbe.org/4az0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4az0 RCSB], [https://www.ebi.ac.uk/pdbsum/4az0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4az0 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4az0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4az0 OCA], [https://pdbe.org/4az0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4az0 RCSB], [https://www.ebi.ac.uk/pdbsum/4az0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4az0 ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
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[[https://www.uniprot.org/uniprot/PPGB_HUMAN PPGB_HUMAN]] Defects in CTSA are the cause of galactosialidosis (GSL) [MIM:[https://omim.org/entry/256540 256540]]. A lysosomal storage disease associated with a combined deficiency of beta-galactosidase and neuraminidase, secondary to a defect in cathepsin A. All patients have clinical manifestations typical of a lysosomal disorder, such as coarse facies, cherry red spots, vertebral changes, foam cells in the bone marrow, and vacuolated lymphocytes. Three phenotypic subtypes are recognized. The early infantile form is associated with fetal hydrops, edema, ascites, visceromegaly, skeletal dysplasia, and early death. The late infantile type is characterized by hepatosplenomegaly, growth retardation, cardiac involvement, and a normal or mildly affected mental state. The juvenile/adult form is characterized by myoclonus, ataxia, angiokeratoma, mental retardation, neurologic deterioration, absence of visceromegaly, and long survival.<ref>PMID:1756715</ref> <ref>PMID:8514852</ref> <ref>PMID:8968752</ref> <ref>PMID:10944848</ref>
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[https://www.uniprot.org/uniprot/PPGB_HUMAN PPGB_HUMAN] Defects in CTSA are the cause of galactosialidosis (GSL) [MIM:[https://omim.org/entry/256540 256540]. A lysosomal storage disease associated with a combined deficiency of beta-galactosidase and neuraminidase, secondary to a defect in cathepsin A. All patients have clinical manifestations typical of a lysosomal disorder, such as coarse facies, cherry red spots, vertebral changes, foam cells in the bone marrow, and vacuolated lymphocytes. Three phenotypic subtypes are recognized. The early infantile form is associated with fetal hydrops, edema, ascites, visceromegaly, skeletal dysplasia, and early death. The late infantile type is characterized by hepatosplenomegaly, growth retardation, cardiac involvement, and a normal or mildly affected mental state. The juvenile/adult form is characterized by myoclonus, ataxia, angiokeratoma, mental retardation, neurologic deterioration, absence of visceromegaly, and long survival.<ref>PMID:1756715</ref> <ref>PMID:8514852</ref> <ref>PMID:8968752</ref> <ref>PMID:10944848</ref>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/PPGB_HUMAN PPGB_HUMAN]] Protective protein appears to be essential for both the activity of beta-galactosidase and neuraminidase, it associates with these enzymes and exerts a protective function necessary for their stability and activity. This protein is also a carboxypeptidase and can deamidate tachykinins.<ref>PMID:1907282</ref>
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[https://www.uniprot.org/uniprot/PPGB_HUMAN PPGB_HUMAN] Protective protein appears to be essential for both the activity of beta-galactosidase and neuraminidase, it associates with these enzymes and exerts a protective function necessary for their stability and activity. This protein is also a carboxypeptidase and can deamidate tachykinins.<ref>PMID:1907282</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Carboxypeptidase C]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Buning, C]]
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[[Category: Buning C]]
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[[Category: Hiss, K]]
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[[Category: Hiss K]]
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[[Category: Horstick, G]]
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[[Category: Horstick G]]
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[[Category: Huebschle, T]]
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[[Category: Huebschle T]]
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[[Category: Kannt, A]]
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[[Category: Kannt A]]
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[[Category: Kohlmann, M]]
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[[Category: Kohlmann M]]
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[[Category: Kroll, K]]
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[[Category: Kroll K]]
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[[Category: Linz, D]]
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[[Category: Linz D]]
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[[Category: Linz, W]]
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[[Category: Linz W]]
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[[Category: Olpp, T]]
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[[Category: Olpp T]]
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[[Category: Pernerstorfer, J]]
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[[Category: Pernerstorfer J]]
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[[Category: Ruetten, H]]
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[[Category: Ruetten H]]
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[[Category: Ruf, S]]
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[[Category: Ruf S]]
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[[Category: Sadowski, T]]
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[[Category: Sadowski T]]
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[[Category: Schmidt, T]]
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[[Category: Schmidt T]]
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[[Category: Schreuder, H]]
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[[Category: Schreuder H]]
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[[Category: Wirth, K]]
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[[Category: Wirth K]]
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[[Category: Cardiovascular drug]]
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[[Category: Drug discovery]]
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[[Category: Hydrolase]]
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Current revision

crystal structure of cathepsin a, complexed with 8a.

PDB ID 4az0

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