4cwc

From Proteopedia

(Difference between revisions)

Current revision

Structure of Rolling Circle Replication Initiator Protein (RepDE) from Staphylococcus aureus

Structural highlights

4cwc is a 2 chain structure with sequence from Staphylococcus aureus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2.9Å
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

REPE_STAAU This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.REPD_STAAU This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.

Publication Abstract from PubMed

Antibiotic resistance in pathogenic bacteria is a continual threat to human health, often residing in extrachromosomal plasmid DNA. Plasmids of the pT181 family are widespread and confer various antibiotic resistances to Staphylococcus aureus. They replicate via a rolling circle mechanism that requires a multi-functional, plasmid-encoded replication protein to initiate replication, recruit a helicase to the site of initiation and terminate replication after DNA synthesis is complete. We present the first atomic resolution structures of three such replication proteins that reveal distinct, functionally relevant conformations. The proteins possess a unique active site and have been shown to contain a catalytically essential metal ion that is bound in a manner distinct from that of any other rolling circle replication proteins. These structures are the first examples of the Rep_trans Pfam family providing insights into the replication of numerous antibiotic resistance plasmids from Gram-positive bacteria, Gram-negative phage and the mobilisation of DNA by conjugative transposons.

Structures of replication initiation proteins from staphylococcal antibiotic resistance plasmids reveal protein asymmetry and flexibility are necessary for replication.,Carr SB, Phillips SE, Thomas CD Nucleic Acids Res. 2016 Jan 20. pii: gkv1539. PMID:26792891^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Carr SB, Phillips SE, Thomas CD. Structures of replication initiation proteins from staphylococcal antibiotic resistance plasmids reveal protein asymmetry and flexibility are necessary for replication. Nucleic Acids Res. 2016 Jan 20. pii: gkv1539. PMID:26792891 doi:http://dx.doi.org/10.1093/nar/gkv1539

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4cwc"

Categories: Large Structures | Staphylococcus aureus | Carr SB | Phillips SEV | Thomas CD

@@ Line 4: / Line 4: @@
 == Structural highlights ==
 <table><tr><td colspan='2'>[[4cwc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CWC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CWC FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cwc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cwc OCA], [https://pdbe.org/4cwc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cwc RCSB], [https://www.ebi.ac.uk/pdbsum/4cwc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cwc ProSAT]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cwc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cwc OCA], [https://pdbe.org/4cwc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cwc RCSB], [https://www.ebi.ac.uk/pdbsum/4cwc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cwc ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[https://www.uniprot.org/uniprot/REPE_STAAU REPE_STAAU]] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.[[https://www.uniprot.org/uniprot/REPD_STAAU REPD_STAAU]] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.
+[https://www.uniprot.org/uniprot/REPE_STAAU REPE_STAAU] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.[https://www.uniprot.org/uniprot/REPD_STAAU REPD_STAAU] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==

4cwc

From Proteopedia

Current revision

Structure of Rolling Circle Replication Initiator Protein (RepDE) from Staphylococcus aureus

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

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