1j3d
From Proteopedia
(Difference between revisions)
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==Solution structure of the C-terminal domain of the HMGB2== | ==Solution structure of the C-terminal domain of the HMGB2== | ||
| - | <StructureSection load='1j3d' size='340' side='right'caption='[[1j3d | + | <StructureSection load='1j3d' size='340' side='right'caption='[[1j3d]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1j3d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1j3d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J3D FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j3d OCA], [https://pdbe.org/1j3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j3d RCSB], [https://www.ebi.ac.uk/pdbsum/1j3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j3d ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j3d OCA], [https://pdbe.org/1j3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j3d RCSB], [https://www.ebi.ac.uk/pdbsum/1j3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j3d ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/HMGB2_PIG HMGB2_PIG] DNA binding proteins that associates with chromatin and has the ability to bend DNA. Binds preferentially single-stranded DNA. Involved in V(D)J recombination by acting as a cofactor of the RAG complex. Acts by stimulating cleavage and RAG protein binding at the 23 bp spacer of conserved recombination signal sequences (RSS) (By similarity). | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Sus scrofa]] |
| - | [[Category: Kurita | + | [[Category: Kurita J]] |
| - | [[Category: Shimahara | + | [[Category: Shimahara H]] |
| - | [[Category: Tate | + | [[Category: Tate S]] |
| - | [[Category: Yoshida | + | [[Category: Yoshida M]] |
| - | + | ||
| - | + | ||
Current revision
Solution structure of the C-terminal domain of the HMGB2
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