1ujr

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Current revision (23:54, 27 December 2023) (edit) (undo)
 
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==Solution structure of WWE domain in BAB28015==
==Solution structure of WWE domain in BAB28015==
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<StructureSection load='1ujr' size='340' side='right'caption='[[1ujr]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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<StructureSection load='1ujr' size='340' side='right'caption='[[1ujr]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1ujr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UJR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1ujr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UJR FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AK012080 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ujr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujr OCA], [https://pdbe.org/1ujr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ujr RCSB], [https://www.ebi.ac.uk/pdbsum/1ujr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ujr ProSAT], [https://www.topsan.org/Proteins/RSGI/1ujr TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ujr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujr OCA], [https://pdbe.org/1ujr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ujr RCSB], [https://www.ebi.ac.uk/pdbsum/1ujr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ujr ProSAT], [https://www.topsan.org/Proteins/RSGI/1ujr TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/RN146_MOUSE RN146_MOUSE]] E3 ubiquitin-protein ligase that specifically binds poly-ADP-ribosylated (PARsylated) proteins and mediates their ubiquitination and subsequent degradation. May regulate many important biological processes, such as cell survival and DNA damage response. Acts as an activator of the Wnt signaling pathway by mediating the ubiquitination of PARsylated AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex. Acts in cooperation with tankyrase proteins (TNKS and TNKS2), which mediate PARsylation of target proteins AXIN1, AXIN2, BLZF1, CASC3, TNKS and TNKS2. Recognizes and binds tankyrase-dependent PARsylated proteins via its WWE domain and mediates their ubiquitination (By similarity). May regulate TNKS and TNKS2 subcellular location, preventing aggregation at a centrosomal location. Neuroprotective protein. Protects the brain against N-methyl-D-aspartate (NMDA) receptor-mediated glutamate excitotoxicity and ischemia, by interfering with PAR-induced cell death, called parthanatos. Prevents nuclear translocation of AIFM1 in a PAR-binding dependent manner. Does not affect PARP1 activation (By similarity). Protects against cell death induced by DNA damaging agents, such as N-methyl-N-nitro-N-nitrosoguanidine (MNNG) and rescues cells from G1 arrest. Promotes cell survival after gamma-irradiation. Facilitates DNA repair. Neuroprotective protein. Protects the brain against N-methyl-D-aspartate (NMDA) receptor-mediated glutamate excitotoxicity and ischemia, by interfering with PAR-induced cell death, called parthanatos. Prevents nuclear translocation of AIFM1 in a PAR-binding dependent manner. Does not affect PARP1 activation.<ref>PMID:21602803</ref> <ref>PMID:21825151</ref>
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[https://www.uniprot.org/uniprot/RN146_MOUSE RN146_MOUSE] E3 ubiquitin-protein ligase that specifically binds poly-ADP-ribosylated (PARsylated) proteins and mediates their ubiquitination and subsequent degradation. May regulate many important biological processes, such as cell survival and DNA damage response. Acts as an activator of the Wnt signaling pathway by mediating the ubiquitination of PARsylated AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex. Acts in cooperation with tankyrase proteins (TNKS and TNKS2), which mediate PARsylation of target proteins AXIN1, AXIN2, BLZF1, CASC3, TNKS and TNKS2. Recognizes and binds tankyrase-dependent PARsylated proteins via its WWE domain and mediates their ubiquitination (By similarity). May regulate TNKS and TNKS2 subcellular location, preventing aggregation at a centrosomal location. Neuroprotective protein. Protects the brain against N-methyl-D-aspartate (NMDA) receptor-mediated glutamate excitotoxicity and ischemia, by interfering with PAR-induced cell death, called parthanatos. Prevents nuclear translocation of AIFM1 in a PAR-binding dependent manner. Does not affect PARP1 activation (By similarity). Protects against cell death induced by DNA damaging agents, such as N-methyl-N-nitro-N-nitrosoguanidine (MNNG) and rescues cells from G1 arrest. Promotes cell survival after gamma-irradiation. Facilitates DNA repair. Neuroprotective protein. Protects the brain against N-methyl-D-aspartate (NMDA) receptor-mediated glutamate excitotoxicity and ischemia, by interfering with PAR-induced cell death, called parthanatos. Prevents nuclear translocation of AIFM1 in a PAR-binding dependent manner. Does not affect PARP1 activation.<ref>PMID:21602803</ref> <ref>PMID:21825151</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Aoki, M]]
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[[Category: Aoki M]]
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[[Category: Hamana, H]]
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[[Category: Hamana H]]
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[[Category: He, F]]
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[[Category: He F]]
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[[Category: Hirota, H]]
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[[Category: Hirota H]]
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[[Category: Inoue, M]]
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[[Category: Inoue M]]
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[[Category: Kigawa, T]]
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[[Category: Kigawa T]]
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[[Category: Kikuno, R]]
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[[Category: Kikuno R]]
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[[Category: Kobayashi, N]]
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[[Category: Kobayashi N]]
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[[Category: Matsuda, T]]
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[[Category: Matsuda T]]
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[[Category: Matsuo, Y]]
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[[Category: Matsuo Y]]
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[[Category: Muto, Y]]
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[[Category: Muto Y]]
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[[Category: Nagase, T]]
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[[Category: Nagase T]]
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[[Category: Nagayama, M]]
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[[Category: Nagayama M]]
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[[Category: Ohara, O]]
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[[Category: Ohara O]]
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[[Category: Osanai, T]]
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[[Category: Osanai T]]
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[[Category: Structural genomic]]
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[[Category: Seki E]]
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[[Category: Seki, E]]
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[[Category: Shirouzu M]]
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[[Category: Shirouzu, M]]
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[[Category: Tanaka A]]
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[[Category: Tanaka, A]]
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[[Category: Terada T]]
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[[Category: Terada, T]]
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[[Category: Yabuki T]]
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[[Category: Yabuki, T]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S]]
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[[Category: Yoshida M]]
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[[Category: Yoshida, M]]
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[[Category: Rsgi]]
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[[Category: Unknown function]]
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[[Category: Wwe domain]]
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Current revision

Solution structure of WWE domain in BAB28015

PDB ID 1ujr

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