2o0f

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Current revision (00:12, 28 December 2023) (edit) (undo)
 
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<SX load='2o0f' size='340' side='right' viewer='molstar' caption='[[2o0f]], [[Resolution|resolution]] 15.50&Aring;' scene=''>
<SX load='2o0f' size='340' side='right' viewer='molstar' caption='[[2o0f]], [[Resolution|resolution]] 15.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2o0f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O0F FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2o0f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O0F FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2h5e|2h5e]]</div></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 15.5&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0f OCA], [https://pdbe.org/2o0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o0f RCSB], [https://www.ebi.ac.uk/pdbsum/2o0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o0f ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0f OCA], [https://pdbe.org/2o0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o0f RCSB], [https://www.ebi.ac.uk/pdbsum/2o0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o0f ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/Q0T8T9_ECOL5 Q0T8T9_ECOL5]] Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP (By similarity).[HAMAP-Rule:MF_00072][SAAS:SAAS004548_004_056011]
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[https://www.uniprot.org/uniprot/RF3_ECOLI RF3_ECOLI] Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.[HAMAP-Rule:MF_00072]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
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[[Category: Bacillus coli migula 1895]]
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[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bouakaz, L]]
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[[Category: Bouakaz L]]
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[[Category: Ehrenberg, M]]
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[[Category: Ehrenberg M]]
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[[Category: Frank, J]]
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[[Category: Frank J]]
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[[Category: Gao, H]]
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[[Category: Gao H]]
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[[Category: Gursky, R]]
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[[Category: Gursky R]]
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[[Category: Huang, C]]
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[[Category: Huang C]]
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[[Category: Liu, Y]]
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[[Category: Liu Y]]
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[[Category: Rawat, U]]
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[[Category: Rawat U]]
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[[Category: Sanyal, S]]
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[[Category: Sanyal S]]
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[[Category: Song, H]]
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[[Category: Song H]]
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[[Category: Wang, C]]
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[[Category: Wang C]]
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[[Category: Zavialov, A]]
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[[Category: Zavialov A]]
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[[Category: Zhou, Z]]
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[[Category: Zhou Z]]
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[[Category: Cryo-em]]
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[[Category: Rf3]]
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[[Category: Ribosome]]
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[[Category: Translation]]
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Current revision

Docking of the modified RF3 X-ray structure into cryo-EM map of E.coli 70S ribosome bound with RF3

2o0f, resolution 15.50Å

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