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2o18

From Proteopedia

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Current revision (00:12, 28 December 2023) (edit) (undo)
 
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<StructureSection load='2o18' size='340' side='right'caption='[[2o18]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='2o18' size='340' side='right'caption='[[2o18]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2o18]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O18 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O18 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2o18]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O18 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O18 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">apbE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o18 OCA], [https://pdbe.org/2o18 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o18 RCSB], [https://www.ebi.ac.uk/pdbsum/2o18 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o18 ProSAT], [https://www.topsan.org/Proteins/NESGC/2o18 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o18 OCA], [https://pdbe.org/2o18 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o18 RCSB], [https://www.ebi.ac.uk/pdbsum/2o18 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o18 ProSAT], [https://www.topsan.org/Proteins/NESGC/2o18 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/APBE_ECOLI APBE_ECOLI]] Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine (HMP) moiety of thiamine (By similarity).
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[https://www.uniprot.org/uniprot/APBE_ECOLI APBE_ECOLI] Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine (HMP) moiety of thiamine (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus coli migula 1895]]
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[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Acton, T B]]
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[[Category: Acton TB]]
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[[Category: Baran, M C]]
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[[Category: Baran MC]]
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[[Category: Cunningham, K]]
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[[Category: Cunningham K]]
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[[Category: Fang, Y]]
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[[Category: Fang Y]]
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[[Category: Hunt, J F]]
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[[Category: Hunt JF]]
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[[Category: Liu, J]]
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[[Category: Liu J]]
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[[Category: Ma, L]]
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[[Category: Ma L]]
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[[Category: Montelione, G T]]
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[[Category: Montelione GT]]
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[[Category: Structural genomic]]
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[[Category: Rost B]]
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[[Category: Rost, B]]
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[[Category: Seetharaman J]]
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[[Category: Seetharaman, J]]
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[[Category: Su M]]
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[[Category: Su, M]]
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[[Category: Tong L]]
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[[Category: Tong, L]]
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[[Category: Wang D]]
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[[Category: Wang, D]]
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[[Category: Xiao R]]
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[[Category: Xiao, R]]
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[[Category: Apbe]]
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[[Category: Lipid binding protein]]
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[[Category: Lipoprotein]]
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[[Category: Nesg]]
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[[Category: PSI, Protein structure initiative]]
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Current revision

Crystal structure of a Thiamine biosynthesis lipoprotein apbE, NorthEast Strcutural Genomics target ER559

PDB ID 2o18

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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