1pl3

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[[Image:1pl3.gif|left|200px]]
[[Image:1pl3.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1pl3 |SIZE=350|CAPTION= <scene name='initialview01'>1pl3</scene>, resolution 1.90&Aring;
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The line below this paragraph, containing "STRUCTURE_1pl3", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=1PG:2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL'>1PG</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellobiose_dehydrogenase_(acceptor) Cellobiose dehydrogenase (acceptor)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.99.18 1.1.99.18] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= CDH-1 AND CDH-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5306 Phanerochaete chrysosporium])
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-->
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|DOMAIN=
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{{STRUCTURE_1pl3| PDB=1pl3 | SCENE= }}
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|RELATEDENTRY=[[1d7b|1D7B]], [[1d7c|1D7C]], [[1d7d|1D7D]], [[1kdg|1KDG]], [[1naa|1NAA]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pl3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pl3 OCA], [http://www.ebi.ac.uk/pdbsum/1pl3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pl3 RCSB]</span>
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}}
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'''Cytochrome Domain Of Cellobiose Dehydrogenase, M65H mutant'''
'''Cytochrome Domain Of Cellobiose Dehydrogenase, M65H mutant'''
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==Reference==
==Reference==
Biophysical and structural analysis of a novel heme B iron ligation in the flavocytochrome cellobiose dehydrogenase., Rotsaert FA, Hallberg BM, de Vries S, Moenne-Loccoz P, Divne C, Renganathan V, Gold MH, J Biol Chem. 2003 Aug 29;278(35):33224-31. Epub 2003 Jun 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12796496 12796496]
Biophysical and structural analysis of a novel heme B iron ligation in the flavocytochrome cellobiose dehydrogenase., Rotsaert FA, Hallberg BM, de Vries S, Moenne-Loccoz P, Divne C, Renganathan V, Gold MH, J Biol Chem. 2003 Aug 29;278(35):33224-31. Epub 2003 Jun 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12796496 12796496]
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[[Category: Cellobiose dehydrogenase (acceptor)]]
 
[[Category: Phanerochaete chrysosporium]]
[[Category: Phanerochaete chrysosporium]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: Rotsaert, F A.J.]]
[[Category: Rotsaert, F A.J.]]
[[Category: Vries, S de.]]
[[Category: Vries, S de.]]
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[[Category: b-type cytochrome]]
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[[Category: B-type cytochrome]]
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[[Category: beta sandwich]]
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[[Category: Beta sandwich]]
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[[Category: bis-his ligation]]
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[[Category: Bis-his ligation]]
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[[Category: fe(ii)-protoporphyrin ix]]
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[[Category: Mutant]]
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[[Category: mutant]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 05:12:30 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:01:10 2008''
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Revision as of 02:12, 3 May 2008

Template:STRUCTURE 1pl3

Cytochrome Domain Of Cellobiose Dehydrogenase, M65H mutant


Overview

The fungal extracellular flavocytochrome cellobiose dehydrogenase (CDH) participates in lignocellulose degradation. The enzyme has a cytochrome domain connected to a flavin-binding domain by a peptide linker. The cytochrome domain contains a 6-coordinate low spin b-type heme with unusual iron ligands and coordination geometry. Wild type CDH is only the second example of a b-type heme with Met-His ligation, and it is the first example of a Met-His ligation of heme b where the ligands are arranged in a nearly perpendicular orientation. To investigate the ligation further, Met65 was replaced with a histidine to create a bis-histidyl ligated iron typical of b-type cytochromes. The variant is expressed as a stable 90-kDa protein that retains the flavin domain catalytic reactivity. However, the ability of the mutant to reduce external one-electron acceptors such as cytochrome c is impaired. Electrochemical measurements demonstrate a decrease in the redox midpoint potential of the heme by 210 mV. In contrast to the wild type enzyme, the ferric state of the protoheme displays a mixed low spin/high spin state at room temperature and low spin character at 90 K, as determined by resonance Raman spectroscopy. The wild type cytochrome does not bind CO, but the ferrous state of the variant forms a CO complex, although the association rate is very low. The crystal structure of the M65H cytochrome domain has been determined at 1.9 A resolution. The variant structure confirms a bis-histidyl ligation but reveals unusual features. As for the wild type enzyme, the ligands have a nearly perpendicular arrangement. Furthermore, the iron is bound by imidazole N delta 1 and N epsilon 2 nitrogen atoms, rather than the typical N epsilon 2/N epsilon 2 coordination encountered in bis-histidyl ligated heme proteins. To our knowledge, this is the first example of a bis-histidyl N delta 1/N epsilon 2-coordinated protoporphyrin IX iron.

About this Structure

1PL3 is a Single protein structure of sequence from Phanerochaete chrysosporium. Full crystallographic information is available from OCA.

Reference

Biophysical and structural analysis of a novel heme B iron ligation in the flavocytochrome cellobiose dehydrogenase., Rotsaert FA, Hallberg BM, de Vries S, Moenne-Loccoz P, Divne C, Renganathan V, Gold MH, J Biol Chem. 2003 Aug 29;278(35):33224-31. Epub 2003 Jun 9. PMID:12796496 Page seeded by OCA on Sat May 3 05:12:30 2008

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