6i0u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:44, 24 January 2024) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of DmTailor in complex with U6 RNA==
==Crystal structure of DmTailor in complex with U6 RNA==
-
<StructureSection load='6i0u' size='340' side='right' caption='[[6i0u]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='6i0u' size='340' side='right'caption='[[6i0u]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6i0u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I0U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I0U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6i0u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I0U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I0U FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.001&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6i0s|6i0s]], [[6i0t|6i0t]], [[6i0v|6i0v]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tailor, CG1091 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i0u OCA], [https://pdbe.org/6i0u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i0u RCSB], [https://www.ebi.ac.uk/pdbsum/6i0u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i0u ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/RNA_uridylyltransferase RNA uridylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.52 2.7.7.52] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i0u OCA], [http://pdbe.org/6i0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i0u RCSB], [http://www.ebi.ac.uk/pdbsum/6i0u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i0u ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TUTT_DROME TUTT_DROME]] Uridylyltransferase which mediates terminal uridylation of miRNAs, leading to their degradation. Has high specificity for splicing-derived miRNAs (mirtrons) and other miRNA substrates containing a 3'-G terminal nucleotide. Appears to be a major suppressor of mirtron biogenesis.<ref>PMID:26145174</ref> <ref>PMID:26145176</ref>
+
[https://www.uniprot.org/uniprot/TUTT_DROME TUTT_DROME] Uridylyltransferase which mediates terminal uridylation of miRNAs, leading to their degradation. Has high specificity for splicing-derived miRNAs (mirtrons) and other miRNA substrates containing a 3'-G terminal nucleotide. Appears to be a major suppressor of mirtron biogenesis.<ref>PMID:26145174</ref> <ref>PMID:26145176</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 19:
</div>
</div>
<div class="pdbe-citations 6i0u" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6i0u" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[RNA uridylyltransferase|RNA uridylyltransferase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Drome]]
+
[[Category: Drosophila melanogaster]]
-
[[Category: RNA uridylyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Ivascu, A]]
+
[[Category: Ivascu A]]
-
[[Category: Jinek, M]]
+
[[Category: Jinek M]]
-
[[Category: Kroupova, A]]
+
[[Category: Kroupova A]]
-
[[Category: Nucleotidyl transferase]]
+
-
[[Category: Terminal uridyl transferase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of DmTailor in complex with U6 RNA

PDB ID 6i0u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools