6i24

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='6i24' size='340' side='right'caption='[[6i24]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
<StructureSection load='6i24' size='340' side='right'caption='[[6i24]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6i24]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Golden_alga Golden alga]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I24 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6i24]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ochromonas_danica Ochromonas danica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I24 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5DD:[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl]+dihydrogen+phosphate'>5DD</scene>, <scene name='pdbligand=9O9:1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol'>9O9</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.43&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OdAUREO1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2986 Golden alga])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5DD:[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl]+dihydrogen+phosphate'>5DD</scene>, <scene name='pdbligand=9O9:1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol'>9O9</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i24 OCA], [http://pdbe.org/6i24 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i24 RCSB], [http://www.ebi.ac.uk/pdbsum/6i24 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i24 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i24 OCA], [https://pdbe.org/6i24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i24 RCSB], [https://www.ebi.ac.uk/pdbsum/6i24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i24 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C5NSW6_OCHDN C5NSW6_OCHDN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Golden alga]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Allemann, R K]]
+
[[Category: Ochromonas danica]]
-
[[Category: Johnson, L A]]
+
[[Category: Allemann RK]]
-
[[Category: Kalvaitis, M E]]
+
[[Category: Johnson LA]]
-
[[Category: Mart, R J]]
+
[[Category: Kalvaitis ME]]
-
[[Category: Rizkallah, P J]]
+
[[Category: Mart RJ]]
-
[[Category: Dark grown]]
+
[[Category: Rizkallah PJ]]
-
[[Category: Fluorescence]]
+
-
[[Category: Fmn]]
+
-
[[Category: Light sensing]]
+
-
[[Category: Lov domain]]
+
-
[[Category: Ochronomas danica]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription factor pas domain]]
+

Revision as of 11:44, 24 January 2024

Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism

PDB ID 6i24

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6i24"
Personal tools