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6i25

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Current revision (11:44, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6i25' size='340' side='right'caption='[[6i25]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
<StructureSection load='6i25' size='340' side='right'caption='[[6i25]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6i25]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Golden_alga Golden alga]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I25 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I25 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6i25]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ochromonas_danica Ochromonas danica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I25 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5DD:[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl]+dihydrogen+phosphate'>5DD</scene>, <scene name='pdbligand=9O9:1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol'>9O9</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OdAUREO1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2986 Golden alga])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5DD:[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl]+dihydrogen+phosphate'>5DD</scene>, <scene name='pdbligand=9O9:1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol'>9O9</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i25 OCA], [http://pdbe.org/6i25 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i25 RCSB], [http://www.ebi.ac.uk/pdbsum/6i25 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i25 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i25 OCA], [https://pdbe.org/6i25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i25 RCSB], [https://www.ebi.ac.uk/pdbsum/6i25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i25 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/C5NSW6_OCHDN C5NSW6_OCHDN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Golden alga]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Kalvaitis, M E]]
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[[Category: Ochromonas danica]]
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[[Category: Rizkallah, P J]]
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[[Category: Kalvaitis ME]]
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[[Category: Dark grown]]
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[[Category: Rizkallah PJ]]
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[[Category: Fluorescence]]
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[[Category: Fmn]]
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[[Category: Light sensing]]
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[[Category: Lov domain]]
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[[Category: Ochronomas danica]]
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[[Category: Transcription]]
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[[Category: Transcription factor pas domain]]
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Current revision

Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism

PDB ID 6i25

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