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6i48

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Current revision (11:46, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6i48' size='340' side='right'caption='[[6i48]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='6i48' size='340' side='right'caption='[[6i48]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6i48]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Psea8 Psea8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I48 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I48 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6i48]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_LESB58 Pseudomonas aeruginosa LESB58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I48 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I48 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=H2H:(2~{R})-4-[6-(2-fluoranyl-4-methoxy-phenyl)-3-oxidanylidene-1~{H}-pyrrolo[1,2-c]imidazol-2-yl]-2-methyl-2-methylsulfonyl-~{N}-oxidanyl-butanamide'>H2H</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.196&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lpxC, PLES_47851 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=557722 PSEA8])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=H2H:(2~{R})-4-[6-(2-fluoranyl-4-methoxy-phenyl)-3-oxidanylidene-1~{H}-pyrrolo[1,2-c]imidazol-2-yl]-2-methyl-2-methylsulfonyl-~{N}-oxidanyl-butanamide'>H2H</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/UDP-3-O-acyl-N-acetylglucosamine_deacetylase UDP-3-O-acyl-N-acetylglucosamine deacetylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.108 3.5.1.108] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i48 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i48 OCA], [https://pdbe.org/6i48 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i48 RCSB], [https://www.ebi.ac.uk/pdbsum/6i48 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i48 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i48 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i48 OCA], [http://pdbe.org/6i48 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i48 RCSB], [http://www.ebi.ac.uk/pdbsum/6i48 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i48 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/LPXC_PSEA8 LPXC_PSEA8]] Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.
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[https://www.uniprot.org/uniprot/LPXC_PSEA8 LPXC_PSEA8] Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6i48" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6i48" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[UDP-3-O-acyl-N-acetylglucosamine deacetylase|UDP-3-O-acyl-N-acetylglucosamine deacetylase]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Psea8]]
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[[Category: Pseudomonas aeruginosa LESB58]]
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[[Category: UDP-3-O-acyl-N-acetylglucosamine deacetylase]]
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[[Category: Blumstein A-C]]
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[[Category: Blumstein, A C]]
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[[Category: Bur D]]
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[[Category: Bur, D]]
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[[Category: Diethelm S]]
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[[Category: Diethelm, S]]
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[[Category: Enderlin-Paput M]]
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[[Category: Enderlin-Paput, M]]
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[[Category: Gauvin J-C]]
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[[Category: Gauvin, J C]]
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[[Category: Gnerre C]]
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[[Category: Gnerre, C]]
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[[Category: Hermann C]]
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[[Category: Hermann, C]]
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[[Category: Hubschwerlen C]]
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[[Category: Hubschwerlen, C]]
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[[Category: Jacob L]]
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[[Category: Jacob, L]]
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[[Category: Lange R]]
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[[Category: Lange, R]]
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[[Category: Locher HH]]
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[[Category: Locher, H H]]
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[[Category: Mac Sweeney A]]
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[[Category: Masse, F]]
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[[Category: Masse F]]
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[[Category: Mathieu, G]]
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[[Category: Mathieu G]]
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[[Category: Mirre, A]]
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[[Category: Mirre A]]
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[[Category: Panchaud, P]]
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[[Category: Panchaud P]]
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[[Category: Ritz, D]]
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[[Category: Ritz D]]
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[[Category: Rueedi, G]]
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[[Category: Rueedi G]]
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[[Category: Schmitt, C]]
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[[Category: Schmitt C]]
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[[Category: Seeland, S]]
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[[Category: Seeland S]]
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[[Category: Seiler, P]]
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[[Category: Seiler P]]
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[[Category: Specklin, J L]]
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[[Category: Specklin J-L]]
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[[Category: Surivet, J P]]
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[[Category: Surivet J-P]]
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[[Category: Sweeney, A Mac]]
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[[Category: Tidten-Luksch N]]
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[[Category: Tidten-Luksch, N]]
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[[Category: Hydrolase]]
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[[Category: Inhibitor]]
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Current revision

Structure of P. aeruginosa LpxC with compound 12: (2R)-4-(6-(2-Fluoro-4-methoxyphenyl)-3-oxo-1H-pyrrolo[1,2-c]imidazol-2(3H)-yl)-N-hydroxy-2-methyl-2-(methylsulfonyl)butanamide

PDB ID 6i48

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