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| <StructureSection load='6ibl' size='340' side='right'caption='[[6ibl]], [[Resolution|resolution]] 2.70Å' scene=''> | | <StructureSection load='6ibl' size='340' side='right'caption='[[6ibl]], [[Resolution|resolution]] 2.70Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6ibl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama] and [http://en.wikipedia.org/wiki/Melga Melga]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6h7k 6h7k]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IBL OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6IBL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6ibl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12], [https://en.wikipedia.org/wiki/Lama_glama Lama glama] and [https://en.wikipedia.org/wiki/Meleagris_gallopavo Meleagris gallopavo]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6h7k 6h7k]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IBL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IBL FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2CV:HEGA-10'>2CV</scene>, <scene name='pdbligand=H98:~{N}-[5-[(1~{R})-2-[[(2~{R})-1-(4-methoxyphenyl)propan-2-yl]amino]-1-oxidanyl-ethyl]-2-oxidanyl-phenyl]methanamide'>H98</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ADRB1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9103 MELGA])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2CV:HEGA-10'>2CV</scene>, <scene name='pdbligand=H98:~{N}-[5-[(1~{R})-2-[[(2~{R})-1-(4-methoxyphenyl)propan-2-yl]amino]-1-oxidanyl-ethyl]-2-oxidanyl-phenyl]methanamide'>H98</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ibl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ibl OCA], [http://pdbe.org/6ibl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ibl RCSB], [http://www.ebi.ac.uk/pdbsum/6ibl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ibl ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ibl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ibl OCA], [https://pdbe.org/6ibl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ibl RCSB], [https://www.ebi.ac.uk/pdbsum/6ibl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ibl ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/THIO_ECOLI THIO_ECOLI]] Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | + | [https://www.uniprot.org/uniprot/THIO_ECOLI THIO_ECOLI] Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions.[https://www.uniprot.org/uniprot/ADRB1_MELGA ADRB1_MELGA] Beta-adrenergic receptors mediate the catecholamine-induced activation of adenylate cyclase through the action of G proteins. This receptor binds epinephrine and norepinephrine with approximately equal affinity. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | | |
| ==See Also== | | ==See Also== |
| + | *[[Adrenergic receptor 3D structures|Adrenergic receptor 3D structures]] |
| *[[Antibody 3D structures|Antibody 3D structures]] | | *[[Antibody 3D structures|Antibody 3D structures]] |
| *[[3D structures of non-human antibody|3D structures of non-human antibody]] | | *[[3D structures of non-human antibody|3D structures of non-human antibody]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Camelus glama]] | + | [[Category: Escherichia coli K-12]] |
| + | [[Category: Lama glama]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Melga]] | + | [[Category: Meleagris gallopavo]] |
- | [[Category: Dore, A S]] | + | [[Category: Dore AS]] |
- | [[Category: Edwards, P C]] | + | [[Category: Edwards PC]] |
- | [[Category: Leslie, A G.W]] | + | [[Category: Leslie AGW]] |
- | [[Category: Tate, C G]] | + | [[Category: Tate CG]] |
- | [[Category: Warne, T]] | + | [[Category: Warne T]] |
- | [[Category: Activated]]
| + | |
- | [[Category: Agonist]]
| + | |
- | [[Category: Beta1 adrenoceptor]]
| + | |
- | [[Category: Immune system]]
| + | |
- | [[Category: Nanobody]]
| + | |
| Structural highlights
Function
THIO_ECOLI Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions.ADRB1_MELGA Beta-adrenergic receptors mediate the catecholamine-induced activation of adenylate cyclase through the action of G proteins. This receptor binds epinephrine and norepinephrine with approximately equal affinity.
Publication Abstract from PubMed
The beta1-adrenoceptor (beta1AR) is a G-protein-coupled receptor (GPCR) that couples(1) to the heterotrimeric G protein Gs. G-protein-mediated signalling is terminated by phosphorylation of the C terminus of the receptor by GPCR kinases (GRKs) and by coupling of beta-arrestin 1 (betaarr1, also known as arrestin 2), which displaces Gs and induces signalling through the MAP kinase pathway(2). The ability of synthetic agonists to induce signalling preferentially through either G proteins or arrestins-known as biased agonism(3)-is important in drug development, because the therapeutic effect may arise from only one signalling cascade, whereas the other pathway may mediate undesirable side effects(4). To understand the molecular basis for arrestin coupling, here we determined the cryo-electron microscopy structure of the beta1AR-betaarr1 complex in lipid nanodiscs bound to the biased agonist formoterol(5), and the crystal structure of formoterol-bound beta1AR coupled to the G-protein-mimetic nanobody(6) Nb80. betaarr1 couples to beta1AR in a manner distinct to that(7) of Gs coupling to beta2AR-the finger loop of betaarr1 occupies a narrower cleft on the intracellular surface, and is closer to transmembrane helix H7 of the receptor when compared with the C-terminal alpha5 helix of Gs. The conformation of the finger loop in betaarr1 is different from that adopted by the finger loop of visual arrestin when it couples to rhodopsin(8). beta1AR coupled to betaarr1 shows considerable differences in structure compared with beta1AR coupled to Nb80, including an inward movement of extracellular loop 3 and the cytoplasmic ends of H5 and H6. We observe weakened interactions between formoterol and two serine residues in H5 at the orthosteric binding site of beta1AR, and find that formoterol has a lower affinity for the beta1AR-betaarr1 complex than for the beta1AR-Gs complex. The structural differences between these complexes of beta1AR provide a foundation for the design of small molecules that could bias signalling in the beta-adrenoceptors.
Molecular basis of beta-arrestin coupling to formoterol-bound beta1-adrenoceptor.,Lee Y, Warne T, Nehme R, Pandey S, Dwivedi-Agnihotri H, Chaturvedi M, Edwards PC, Garcia-Nafria J, Leslie AGW, Shukla AK, Tate CG Nature. 2020 Jun 17. pii: 10.1038/s41586-020-2419-1. doi:, 10.1038/s41586-020-2419-1. PMID:32555462[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Lee Y, Warne T, Nehme R, Pandey S, Dwivedi-Agnihotri H, Chaturvedi M, Edwards PC, Garcia-Nafria J, Leslie AGW, Shukla AK, Tate CG. Molecular basis of beta-arrestin coupling to formoterol-bound beta1-adrenoceptor. Nature. 2020 Jun 17. pii: 10.1038/s41586-020-2419-1. doi:, 10.1038/s41586-020-2419-1. PMID:32555462 doi:http://dx.doi.org/10.1038/s41586-020-2419-1
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