6q6c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:53, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6q6c' size='340' side='right'caption='[[6q6c]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='6q6c' size='340' side='right'caption='[[6q6c]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6q6c]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Q6C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6Q6C FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6q6c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Conus_striatus Conus striatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Q6C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Q6C FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6q6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6q6c OCA], [http://pdbe.org/6q6c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6q6c RCSB], [http://www.ebi.ac.uk/pdbsum/6q6c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6q6c ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6q6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6q6c OCA], [https://pdbe.org/6q6c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6q6c RCSB], [https://www.ebi.ac.uk/pdbsum/6q6c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6q6c ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/VKTS1_CONST VKTS1_CONST]] Blocks specifically voltage-activated potassium channels (Kv) of the Shaker family (IC(50)=1.33 nM).<ref>PMID:15833744</ref>
+
[https://www.uniprot.org/uniprot/VKTS1_CONST VKTS1_CONST] Blocks specifically voltage-activated potassium channels (Kv) of the Shaker family (IC(50)=1.33 nM).<ref>PMID:15833744</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Voltage-dependent potassium channels (K(v)s) gate in response to changes in electrical membrane potential by coupling a voltage-sensing module with a K(+)-selective pore. Animal toxins targeting K(v)s are classified as pore blockers, which physically plug the ion conduction pathway, or as gating modifiers, which disrupt voltage sensor movements. A third group of toxins blocks K(+) conduction by an unknown mechanism via binding to the channel turrets. Here, we show that Conkunitzin-S1 (Cs1), a peptide toxin isolated from cone snail venom, binds at the turrets of K(v)1.2 and targets a network of hydrogen bonds that govern water access to the peripheral cavities that surround the central pore. The resulting ectopic water flow triggers an asymmetric collapse of the pore by a process resembling that of inherent slow inactivation. Pore modulation by animal toxins exposes the peripheral cavity of K(+) channels as a novel pharmacological target and provides a rational framework for drug design.
 +
 
 +
Pore-modulating toxins exploit inherent slow inactivation to block K(+) channels.,Karbat I, Altman-Gueta H, Fine S, Szanto T, Hamer-Rogotner S, Dym O, Frolow F, Gordon D, Panyi G, Gurevitz M, Reuveny E Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18700-18709. doi: , 10.1073/pnas.1908903116. Epub 2019 Aug 23. PMID:31444298<ref>PMID:31444298</ref>
 +
 
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6q6c" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Conus striatus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Dym, O]]
+
[[Category: Dym O]]
-
[[Category: Fine, S]]
+
[[Category: Fine S]]
-
[[Category: Frolow, F]]
+
[[Category: Frolow F]]
-
[[Category: Gordon, D]]
+
[[Category: Gordon D]]
-
[[Category: Gueta, H]]
+
[[Category: Gueta H]]
-
[[Category: Gurevitz, M]]
+
[[Category: Gurevitz M]]
-
[[Category: Hamer-Rogotner, S]]
+
[[Category: Hamer-Rogotner S]]
-
[[Category: Karbat, I]]
+
[[Category: Karbat I]]
-
[[Category: Panyi, G]]
+
[[Category: Panyi G]]
-
[[Category: Reuveny, E]]
+
[[Category: Reuveny E]]
-
[[Category: Szanto, T]]
+
[[Category: Szanto T]]
-
[[Category: Toxin]]
+

Current revision

Pore-modulating toxins exploit inherent slow inactivation to block K+ channels

PDB ID 6q6c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools