6r0u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:12, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6r0u' size='340' side='right'caption='[[6r0u]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='6r0u' size='340' side='right'caption='[[6r0u]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6r0u]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R0U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6R0U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6r0u]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Magnetospirillum_gryphiswaldense_MSR-1 Magnetospirillum gryphiswaldense MSR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R0U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6R0U FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EF2:S-THALIDOMIDE'>EF2</scene>, <scene name='pdbligand=JO5:4-azanyl-2-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]isoindole-1,3-dione'>JO5</scene>, <scene name='pdbligand=JO8:3-azanyl-2-[[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]carbamoyl]benzoic+acid'>JO8</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6r0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r0u OCA], [http://pdbe.org/6r0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6r0u RCSB], [http://www.ebi.ac.uk/pdbsum/6r0u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6r0u ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EF2:S-THALIDOMIDE'>EF2</scene>, <scene name='pdbligand=JO5:4-azanyl-2-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]isoindole-1,3-dione'>JO5</scene>, <scene name='pdbligand=JO8:3-azanyl-2-[[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]carbamoyl]benzoic+acid'>JO8</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6r0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r0u OCA], [https://pdbe.org/6r0u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6r0u RCSB], [https://www.ebi.ac.uk/pdbsum/6r0u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6r0u ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A4TVL0_9PROT A4TVL0_9PROT]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 19:
</div>
</div>
<div class="pdbe-citations 6r0u" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6r0u" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ubiquitin protein ligase 3D structures|Ubiquitin protein ligase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 21: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Hartmann, M D]]
+
[[Category: Magnetospirillum gryphiswaldense MSR-1]]
-
[[Category: Heim, C]]
+
[[Category: Hartmann MD]]
-
[[Category: Hydrolysis product]]
+
[[Category: Heim C]]
-
[[Category: Protac]]
+
-
[[Category: Protein degradation]]
+
-
[[Category: Proteolysis targeting chimera]]
+
-
[[Category: Signaling protein]]
+

Current revision

Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with compound 5a and hydrolysis product

PDB ID 6r0u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6r0u"
Personal tools